Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNGTTP1-201ENST00000420965 728 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 RPL23P10-201ENST00000468780 412 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AP003385.3-201ENST00000472498 287 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 MINOS1P4-201ENST00000515470 318 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 SNORA18.6-201ENST00000516792 115 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL161670.1-201ENST00000554348 137 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 MEMO1P5-201ENST00000604810 406 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL137000.1-201ENST00000610528 1244 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AC008250.2-201ENST00000615261 205 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AC040168.1-201ENST00000623594 991 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 CLUHP10-201ENST00000631979 980 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AL359715.3-201ENST00000569267 2123 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AP005901.5-201ENST00000545779 1796 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 MAPK10-281ENST00000641170 3070 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.43□□□□□ -1.22
NPAS3Q8IXF0 AC095038.1-201ENST00000429248 1591 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC245505.2-201ENST00000553572 3055 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 SNORD94-201ENST00000386037 137 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC093719.1-202ENST00000392735 373 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 CYCSP45-201ENST00000402289 315 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AL033519.1-201ENST00000407266 307 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AL353133.1-201ENST00000407695 401 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 PRELID1P2-201ENST00000407805 396 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 RN7SKP205-201ENST00000410999 307 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AL139128.1-201ENST00000413921 941 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AL645937.1-202ENST00000421799 937 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 FTH1P20-201ENST00000434913 548 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 CALM1P1-201ENST00000442082 433 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC091685.2-201ENST00000454924 864 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 CST12P-201ENST00000457644 362 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 RPL7P48-201ENST00000461513 746 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC021220.1-201ENST00000507445 630 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 RPL10P18-201ENST00000519384 309 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 ST13P6-201ENST00000522430 1102 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC138832.1-201ENST00000522871 556 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC015801.1-201ENST00000585651 153 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC011497.2-201ENST00000600255 639 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC005014.2-201ENST00000607795 599 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC103710.1-201ENST00000610003 901 ntBASIC7.42□□□□□ -1.22
NPAS3Q8IXF0 AC068831.8-201ENST00000620171 435 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms