Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RPL7L1P9-201ENST00000431298 745 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 SETP20-201ENST00000457046 852 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AC108693.1-201ENST00000496068 432 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AL671862.1-201ENST00000515851 349 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 MIR6837-201ENST00000620884 64 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AL512356.3-201ENST00000623005 461 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AC136428.4-201ENST00000634254 1155 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 SAMMSON-227ENST00000642114 1199 ntBASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.28□□□□□ -1.56
CDKL3Q8IVW4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC235565.1-201ENST00000456962 1325 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 RNA5SP183-201ENST00000362452 119 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 RN7SKP113-201ENST00000363891 295 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 RNA5SP435-201ENST00000364044 108 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 MIR600-201ENST00000385007 98 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 MIR1182-201ENST00000408363 97 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 RN7SKP59-201ENST00000410520 314 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AL139148.1-201ENST00000427122 680 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC004980.3-201ENST00000447046 365 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 MRPL35P2-201ENST00000448009 511 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 RPL7P39-201ENST00000481157 744 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 MORF4L2P1-201ENST00000503761 858 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC105031.1-201ENST00000518550 476 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC024940.3-201ENST00000538551 316 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AL049779.2-201ENST00000553847 315 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC009852.2-201ENST00000567898 485 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC011840.5-201ENST00000582125 771 ntBASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDKL3Q8IVW4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 NAMPTP1-201ENST00000440465 2514 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 SNORA2.3-201ENST00000383920 135 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 OR3A2-201ENST00000408891 1076 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AL121878.1-201ENST00000418638 859 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AL121776.1-201ENST00000429337 372 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 RN7SL443P-201ENST00000464331 290 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 SIAH1P1-201ENST00000479411 923 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 RPL7P51-201ENST00000490532 749 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 BX510359.5-201ENST00000515651 304 ntBASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.26□□□□□ -1.57
CDKL3Q8IVW4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms