Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 RNA5SP435-201ENST00000364044 108 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AL139039.2-201ENST00000407436 479 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 RN7SKP293-201ENST00000411389 296 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC007064.3-201ENST00000422608 359 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 MAPRE1P3-201ENST00000435438 796 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC012075.1-201ENST00000436549 580 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC023141.9-201ENST00000458734 412 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC021660.1-201ENST00000465006 554 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 RN7SL174P-201ENST00000475578 289 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 STRADBP1-201ENST00000478954 1281 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 COX6B1P2-201ENST00000489624 230 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 MTND6P2-201ENST00000512226 524 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 RPS27AP18-201ENST00000515536 459 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 SCARNA16.4-201ENST00000516956 187 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 IGKV3D-34-201ENST00000522638 302 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC078878.1-201ENST00000539832 958 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC020978.7-201ENST00000575953 1187 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 CASC19-248ENST00000641674 1356 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AC079298.1-201ENST00000625026 1619 ntBASIC4.86□□□□□ -1.63
NIPAL3Q6P499 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC133552.1-201ENST00000569988 4007 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC097461.1-201ENST00000568928 2821 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 OR9G4-201ENST00000302957 984 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 RNU6-1251P-201ENST00000364502 107 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 MTCYBP7-201ENST00000419540 1134 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AL391987.1-201ENST00000441025 200 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 RANP1-206ENST00000455094 651 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC245028.2-201ENST00000458673 253 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC100832.1-201ENST00000471945 383 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 RPL15P21-201ENST00000495592 567 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC090638.1-201ENST00000498296 909 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 RNU6-551P-201ENST00000516661 103 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC060766.1-201ENST00000590824 627 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AL589674.2-201ENST00000604304 337 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 MIR6839-201ENST00000620425 113 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 AC138965.3-201ENST00000623875 498 ntBASIC4.85□□□□□ -1.63
NIPAL3Q6P499 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NIPAL3Q6P499 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms