Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AC079905.1-201ENST00000549280 475 ntBASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AC022069.1-201ENST00000582910 658 ntBASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AC004492.1-201ENST00000607036 742 ntBASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AC011374.2-201ENST00000607135 526 ntBASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AL357562.1-201ENST00000624911 609 ntBASIC8.46□□□□□ -1.06
CDCA8Q53HL2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 GNL2P1-201ENST00000451274 2190 ntBASIC8.46□□□□□ -1.06
CDCA8Q53HL2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDCA8Q53HL2 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC006511.3-201ENST00000624929 1783 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 RNU4-4P-201ENST00000364588 130 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 OR8V1P-201ENST00000395193 873 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 RN7SKP166-201ENST00000410812 305 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC007562.1-201ENST00000421819 517 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 GAPDHP34-201ENST00000432112 823 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 RPS10P18-201ENST00000442662 495 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC023274.2-201ENST00000445264 521 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 NPM1P13-201ENST00000452663 865 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC105420.1-201ENST00000504389 582 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 CYP4F27P-201ENST00000514557 494 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 SCARNA18.1-201ENST00000516330 83 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 MTCO3P15-201ENST00000526563 574 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC090888.3-201ENST00000558917 509 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AP005119.1-201ENST00000580956 292 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 RNU4ATAC-201ENST00000580972 127 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AL138895.2-201ENST00000603019 178 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AP000811.1-201ENST00000603803 651 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC106791.2-201ENST00000604680 391 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC104073.3-201ENST00000610942 955 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 FRG1HP-204ENST00000617940 757 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AC073569.3-201ENST00000619055 682 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AL033543.1-201ENST00000623440 13454 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 AL390237.1-201ENST00000404226 1415 ntBASIC8.45□□□□□ -1.06
CDCA8Q53HL2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDCA8Q53HL2 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 CASC19-243ENST00000641588 1546 ntBASIC8.44□□□□□ -1.06
CDCA8Q53HL2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 AL161901.1-201ENST00000624954 3425 ntBASIC8.44□□□□□ -1.06
CDCA8Q53HL2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDCA8Q53HL2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms