Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.58□□□□□ -1.36
RHBDL3P58872 RN7SKP99-201ENST00000517028 307 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AP001804.1-201ENST00000526868 919 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AC025918.2-201ENST00000558683 763 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 RBM22P1-201ENST00000578589 1214 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.58□□□□□ -1.36
RHBDL3P58872 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 MIR7155-201ENST00000615925 56 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RHBDL3P58872 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RHBDL3P58872 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
RHBDL3P58872 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RHBDL3P58872 AL731532.1-201ENST00000623972 4236 ntBASIC6.58□□□□□ -1.36
RHBDL3P58872 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.58□□□□□ -1.36
RHBDL3P58872 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 SAMMSON-213ENST00000641336 1521 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC005294.1-201ENST00000355509 281 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 RNU6-650P-201ENST00000365658 111 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.57□□□□□ -1.36
RHBDL3P58872 RNU2-17P-201ENST00000410290 190 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC105402.1-201ENST00000413336 545 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 RPSAP35-201ENST00000413753 818 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 RPS26P38-201ENST00000414476 348 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 METTL15P3-201ENST00000415522 1221 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 EIF2S2P3-201ENST00000428356 999 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC005033.1-201ENST00000428904 813 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.57□□□□□ -1.36
RHBDL3P58872 FAR2P1-206ENST00000449736 709 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 HMGB1P26-201ENST00000452520 628 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 RNU7-27P-201ENST00000459281 62 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 BX284632.1-201ENST00000478218 541 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 NPM1P29-201ENST00000483112 803 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC107398.1-201ENST00000486904 505 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 PDCL3P4-201ENST00000489621 720 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.57□□□□□ -1.36
RHBDL3P58872 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.57□□□□□ -1.36
RHBDL3P58872 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.57□□□□□ -1.36
RHBDL3P58872 RNU6-1004P-201ENST00000516584 111 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.57□□□□□ -1.36
RHBDL3P58872 OR4A46P-201ENST00000527255 933 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 PMS2P3-207ENST00000529061 717 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 OR10G5P-201ENST00000532733 358 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 HAUS8P1-201ENST00000549005 542 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC004825.1-201ENST00000555068 586 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC084759.1-201ENST00000561168 290 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.57□□□□□ -1.36
RHBDL3P58872 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.57□□□□□ -1.36
RHBDL3P58872 ZNF92P2-201ENST00000600543 1059 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AL445222.1-201ENST00000607259 628 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC023813.4-201ENST00000607580 580 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AP001033.2-201ENST00000609701 1003 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC109583.2-201ENST00000617367 129 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 AC106730.3-201ENST00000624568 641 ntBASIC6.57□□□□□ -1.36
RHBDL3P58872 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RHBDL3P58872 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RHBDL3P58872 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
RHBDL3P58872 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RHBDL3P58872 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
RHBDL3P58872 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RHBDL3P58872 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.56□□□□□ -1.36
RHBDL3P58872 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
RHBDL3P58872 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.56□□□□□ -1.36
RHBDL3P58872 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 RNU1-146P-201ENST00000364015 165 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RHBDL3P58872 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AL133388.1-201ENST00000404509 287 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AC092651.1-201ENST00000426110 312 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 NPM1P22-201ENST00000427761 952 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.56□□□□□ -1.36
RHBDL3P58872 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.56□□□□□ -1.36
RHBDL3P58872 RPL34P26-201ENST00000445636 354 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 HMGB1P5-202ENST00000451497 985 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms