Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH6P55285 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH6P55285 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH6P55285 RNU1-43P-201ENST00000365052 165 ntBASIC5.34□□□□□ -1.55
CDH6P55285 RN7SKP269-201ENST00000365545 319 ntBASIC5.34□□□□□ -1.55
CDH6P55285 AC007068.1-201ENST00000396690 844 ntBASIC5.34□□□□□ -1.55
CDH6P55285 NUDT19P3-201ENST00000404698 555 ntBASIC5.34□□□□□ -1.55
CDH6P55285 MIR1182-201ENST00000408363 97 ntBASIC5.34□□□□□ -1.55
CDH6P55285 RN7SKP16-201ENST00000410180 299 ntBASIC5.34□□□□□ -1.55
CDH6P55285 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH6P55285 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH6P55285 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH6P55285 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 AC091180.1-201ENST00000462104 372 ntBASIC5.34□□□□□ -1.55
CDH6P55285 UBA52P7-201ENST00000486088 380 ntBASIC5.34□□□□□ -1.55
CDH6P55285 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH6P55285 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 KCTD9P6-201ENST00000522306 950 ntBASIC5.34□□□□□ -1.55
CDH6P55285 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 AC024940.3-201ENST00000538551 316 ntBASIC5.34□□□□□ -1.55
CDH6P55285 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 AL161912.3-201ENST00000605404 628 ntBASIC5.34□□□□□ -1.55
CDH6P55285 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH6P55285 AL451049.1-201ENST00000608672 497 ntBASIC5.34□□□□□ -1.55
CDH6P55285 OR8G7P-201ENST00000616658 848 ntBASIC5.34□□□□□ -1.55
CDH6P55285 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.34□□□□□ -1.55
CDH6P55285 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CDH6P55285 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDH6P55285 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH6P55285 AC011755.1-201ENST00000623763 2049 ntBASIC5.34□□□□□ -1.55
CDH6P55285 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH6P55285 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CDH6P55285 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDH6P55285 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.34□□□□□ -1.56
CDH6P55285 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CDH6P55285 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CDH6P55285 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH6P55285 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH6P55285 AC011503.2-201ENST00000594230 1500 ntBASIC5.33□□□□□ -1.56
CDH6P55285 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.33□□□□□ -1.56
CDH6P55285 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.33□□□□□ -1.56
CDH6P55285 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 AL929601.4-201ENST00000613011 1341 ntBASIC5.33□□□□□ -1.56
CDH6P55285 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH6P55285 U3.32-201ENST00000408116 212 ntBASIC5.33□□□□□ -1.56
CDH6P55285 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH6P55285 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH6P55285 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 OR52B5P-201ENST00000435337 951 ntBASIC5.33□□□□□ -1.56
CDH6P55285 CYCSP24-201ENST00000445119 316 ntBASIC5.33□□□□□ -1.56
CDH6P55285 MTND6P5-201ENST00000448266 512 ntBASIC5.33□□□□□ -1.56
CDH6P55285 AC009127.1-201ENST00000467090 155 ntBASIC5.33□□□□□ -1.56
CDH6P55285 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 KATNBL1P4-201ENST00000503545 918 ntBASIC5.33□□□□□ -1.56
CDH6P55285 ENPP7P11-201ENST00000505915 627 ntBASIC5.33□□□□□ -1.56
CDH6P55285 AC138832.1-201ENST00000522871 556 ntBASIC5.33□□□□□ -1.56
CDH6P55285 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH6P55285 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 AC095055.1-201ENST00000603472 1113 ntBASIC5.33□□□□□ -1.56
CDH6P55285 AC018695.5-201ENST00000605872 315 ntBASIC5.33□□□□□ -1.56
CDH6P55285 AP003072.5-201ENST00000623872 773 ntBASIC5.33□□□□□ -1.56
CDH6P55285 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.33□□□□□ -1.56
CDH6P55285 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 OR52B5P-202ENST00000641118 1110 ntBASIC5.33□□□□□ -1.56
CDH6P55285 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH6P55285 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH6P55285 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH6P55285 SAMMSON-213ENST00000641336 1521 ntBASIC5.33□□□□□ -1.56
CDH6P55285 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH6P55285 CASC19-221ENST00000641309 1382 ntBASIC5.32□□□□□ -1.56
CDH6P55285 AC114947.2-201ENST00000565748 2125 ntBASIC5.32□□□□□ -1.56
CDH6P55285 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH6P55285 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH6P55285 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDH6P55285 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH6P55285 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms