Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PPP1R2P6-201ENST00000478565 588 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC109486.1-201ENST00000486833 374 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 RPL37P23-201ENST00000492641 294 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 SETP14-201ENST00000497538 873 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC109458.1-201ENST00000508858 316 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 CDC42P4-201ENST00000510507 563 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 AP005902.2-201ENST00000518393 307 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC138832.1-201ENST00000522871 556 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC12P31275 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC12P31275 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC12P31275 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 ACTG1P15-201ENST00000570019 1063 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC087683.1-201ENST00000591187 441 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC090181.2-201ENST00000602975 672 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 MTCYBP22-201ENST00000603788 447 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC112220.3-201ENST00000605502 502 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC239868.4-201ENST00000608318 671 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC091932.2-201ENST00000623014 291 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC092192.1-201ENST00000633154 1018 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC011471.4-201ENST00000638271 216 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC087565.3-203ENST00000641018 837 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
HOXC12P31275 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 NCOA4P3-201ENST00000513203 1877 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 DLEU2L-201ENST00000371086 3555 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC12P31275 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC12P31275 AC102941.1-201ENST00000567616 1537 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 MKI67P1-201ENST00000604297 1460 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 AC005832.2-201ENST00000538921 1430 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC12P31275 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
HOXC12P31275 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC12P31275 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC12P31275 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC12P31275 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 RNU6-621P-201ENST00000364752 109 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 RNU6-1119P-201ENST00000384349 108 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 ATP5F1P4-201ENST00000397288 746 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 AL161909.1-201ENST00000397390 712 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 AL133260.1-201ENST00000405720 405 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 RN7SKP205-201ENST00000410999 307 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 USP9YP33-201ENST00000412220 421 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 FCF1P9-201ENST00000412546 282 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 RPLP1P10-201ENST00000413972 339 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 CDK8P2-201ENST00000415020 547 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC12P31275 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC12P31275 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 CYP4F32P-201ENST00000426492 504 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXC12P31275 BX119917.1-201ENST00000432517 502 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HOXC12P31275 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC12P31275 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXC12P31275 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC12P31275 RPL23AP35-201ENST00000451906 501 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 SEPT7P3-201ENST00000455017 621 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC12P31275 SNRPGP9-201ENST00000456025 225 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 SUMO2P2-201ENST00000456482 255 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 AC093899.1-201ENST00000457984 376 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 RN7SL216P-201ENST00000471607 298 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 AC011825.1-201ENST00000484967 388 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 RPS7P6-201ENST00000485777 579 ntBASIC6.1□□□□□ -1.43
HOXC12P31275 AL035404.1-201ENST00000497982 568 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms