Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD40LGP29965 AC023421.1-201ENST00000590535 1785 ntBASIC4.67□□□□□ -1.66
CD40LGP29965 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CD40LGP29965 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
CD40LGP29965 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CD40LGP29965 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CD40LGP29965 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CD40LGP29965 AC006210.2-201ENST00000367074 1545 ntBASIC4.67□□□□□ -1.66
CD40LGP29965 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD40LGP29965 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CD40LGP29965 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD40LGP29965 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CD40LGP29965 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD40LGP29965 AC005294.1-201ENST00000355509 281 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 RNU1-94P-201ENST00000362627 173 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 RNA5SP30-201ENST00000365552 115 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 DBIP1-201ENST00000401435 260 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 RPS3AP2-201ENST00000407190 754 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 RNA5SP146-201ENST00000410743 123 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 RN7SKP29-201ENST00000410957 272 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.66□□□□□ -1.66
CD40LGP29965 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD40LGP29965 BX119321.1-201ENST00000428912 797 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.66□□□□□ -1.66
CD40LGP29965 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.66□□□□□ -1.66
CD40LGP29965 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 AL356981.1-201ENST00000454879 684 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.66□□□□□ -1.66
CD40LGP29965 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 RPL7P41-201ENST00000485823 957 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD40LGP29965 RPEP1-201ENST00000504507 658 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 AL158068.1-201ENST00000506116 616 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 AC027369.2-201ENST00000528030 440 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 CYCSP38-201ENST00000559840 322 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.66□□□□□ -1.66
CD40LGP29965 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.66□□□□□ -1.66
CD40LGP29965 MIR4776-2-201ENST00000580204 80 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.66□□□□□ -1.66
CD40LGP29965 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CD40LGP29965 uc_338.18-201ENST00000615451 175 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 AC244517.3-201ENST00000616254 1235 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 AC079298.2-201ENST00000623885 459 ntBASIC4.66□□□□□ -1.66
CD40LGP29965 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.66□□□□□ -1.66
CD40LGP29965 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.66□□□□□ -1.66
CD40LGP29965 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CD40LGP29965 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD40LGP29965 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD40LGP29965 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD40LGP29965 IFIT1P1-201ENST00000400497 1449 ntBASIC4.65□□□□□ -1.66
CD40LGP29965 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.65□□□□□ -1.66
CD40LGP29965 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.65□□□□□ -1.66
CD40LGP29965 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CD40LGP29965 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CD40LGP29965 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD40LGP29965 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD40LGP29965 TMSB4XP2-201ENST00000335179 210 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CD40LGP29965 RNA5SP110-201ENST00000362638 115 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.65□□□□□ -1.67
CD40LGP29965 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CD40LGP29965 SNORA81-201ENST00000408493 178 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 NENFP1-201ENST00000419476 466 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 NAP1L4P2-201ENST00000425958 899 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 AC126120.1-201ENST00000431082 470 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.65□□□□□ -1.67
CD40LGP29965 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.65□□□□□ -1.67
CD40LGP29965 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.65□□□□□ -1.67
CD40LGP29965 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CD40LGP29965 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.65□□□□□ -1.67
CD40LGP29965 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.65□□□□□ -1.67
CD40LGP29965 NOP56P2-201ENST00000447491 769 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 RPL7AP28-201ENST00000464513 571 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 TRBV8-1-201ENST00000481590 279 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 NIP7P2-201ENST00000485801 544 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.65□□□□□ -1.67
CD40LGP29965 PFN1P8-201ENST00000497012 543 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 LDHAP1-201ENST00000509421 992 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.65□□□□□ -1.67
CD40LGP29965 ENPP7P9-201ENST00000514456 627 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD40LGP29965 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.65□□□□□ -1.67
CD40LGP29965 RNA5SP228-201ENST00000516232 133 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 RN7SKP35-201ENST00000517210 151 ntBASIC4.65□□□□□ -1.67
CD40LGP29965 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.65□□□□□ -1.67
CD40LGP29965 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.65□□□□□ -1.67
CD40LGP29965 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD40LGP29965 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.65□□□□□ -1.67
CD40LGP29965 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.65□□□□□ -1.67
CD40LGP29965 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.67
CD40LGP29965 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.65□□□□□ -1.67
CD40LGP29965 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.65□□□□□ -1.67
CD40LGP29965 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms