Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
NFKB1P19838 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.05□□□□□ -1.28
NFKB1P19838 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NFKB1P19838 Z99496.1-201ENST00000469424 1477 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 AC022819.1-201ENST00000563495 3910 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 AC106872.5-201ENST00000508856 1416 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 AC003985.2-201ENST00000562268 1669 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 Y_RNA.160-201ENST00000363677 92 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RNU4-31P-201ENST00000384211 141 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 MIR525-201ENST00000384978 85 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RN7SKP59-201ENST00000410520 314 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RN7SKP137-201ENST00000411074 307 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RNA5SP280-201ENST00000411230 115 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC013404.1-201ENST00000413068 249 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.04□□□□□ -1.28
NFKB1P19838 GAPDHP69-201ENST00000425504 1008 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 AC002069.1-201ENST00000429649 1159 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 BX322784.1-201ENST00000455793 1077 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 AC079193.1-201ENST00000460497 588 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RN7SL456P-201ENST00000469290 295 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 RN7SL379P-201ENST00000479912 293 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 SSU72P6-201ENST00000532644 488 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.04□□□□□ -1.28
NFKB1P19838 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.04□□□□□ -1.28
NFKB1P19838 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 BNIP3P11-201ENST00000603878 563 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.04□□□□□ -1.28
NFKB1P19838 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.04□□□□□ -1.28
NFKB1P19838 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 AC007347.2-201ENST00000623044 180 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 AC012629.3-201ENST00000623397 328 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 AP000648.2-201ENST00000624182 404 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NFKB1P19838 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 MIR6863-201ENST00000636112 90 ntBASIC7.04□□□□□ -1.28
NFKB1P19838 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.04□□□□□ -1.28
NFKB1P19838 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.04□□□□□ -1.28
NFKB1P19838 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NFKB1P19838 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.04□□□□□ -1.28
NFKB1P19838 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.03□□□□□ -1.28
NFKB1P19838 DCAF13P3-201ENST00000561147 1334 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.03□□□□□ -1.28
NFKB1P19838 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NFKB1P19838 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NFKB1P19838 RNU12-2P-201ENST00000364789 156 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 RNA5SP88-201ENST00000365560 109 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NFKB1P19838 MIR640-201ENST00000385086 96 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NFKB1P19838 SNORA40.3-201ENST00000390964 122 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 MTCO3P40-201ENST00000392516 676 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AL662791.3-201ENST00000413771 776 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 RPSAP60-201ENST00000415403 880 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 AL389915.1-201ENST00000422463 466 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC008850.1-201ENST00000427546 362 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms