Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 AL442639.1-201ENST00000625030 1899 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
TOP2AP11388 AP000547.3-204ENST00000588548 2523 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 RNU4-39P-201ENST00000362455 127 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
TOP2AP11388 RPEP3-201ENST00000425462 676 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 AC138761.5-201ENST00000433967 325 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.63□□□□□ -1.03
TOP2AP11388 GTF2IP11-201ENST00000526931 420 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC8.63□□□□□ -1.03
TOP2AP11388 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.63□□□□□ -1.03
TOP2AP11388 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.63□□□□□ -1.03
TOP2AP11388 MIR3160-1-201ENST00000577972 85 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 MIR5699-201ENST00000578903 90 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 AL590392.1-201ENST00000604960 446 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
TOP2AP11388 AL117339.4-201ENST00000608335 7063 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 AC139713.2-214ENST00000642059 1811 ntBASIC8.63□□□□□ -1.03
TOP2AP11388 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC8.63□□□□□ -1.03
TOP2AP11388 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOP2AP11388 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC8.62□□□□□ -1.03
TOP2AP11388 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC8.62□□□□□ -1.03
TOP2AP11388 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
TOP2AP11388 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TOP2AP11388 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 RNA5SP447-201ENST00000363749 119 ntBASIC8.62□□□□□ -1.03
TOP2AP11388 GTF2IP2-201ENST00000424290 697 ntBASIC8.62□□□□□ -1.03
TOP2AP11388 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.62□□□□□ -1.03
TOP2AP11388 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC8.62□□□□□ -1.03
TOP2AP11388 RN7SKP92-201ENST00000517266 244 ntBASIC8.62□□□□□ -1.03
TOP2AP11388 AC136777.2-201ENST00000522979 358 ntBASIC8.62□□□□□ -1.03
TOP2AP11388 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.62□□□□□ -1.03
TOP2AP11388 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC8.62□□□□□ -1.03
TOP2AP11388 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TOP2AP11388 AC125494.2-201ENST00000602431 657 ntBASIC8.62□□□□□ -1.03
TOP2AP11388 FAM27B-201ENST00000610601 213 ntBASIC8.62□□□□□ -1.03
TOP2AP11388 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC8.62□□□□□ -1.03
TOP2AP11388 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC8.62□□□□□ -1.03
TOP2AP11388 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC8.62□□□□□ -1.03
TOP2AP11388 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TOP2AP11388 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TOP2AP11388 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TOP2AP11388 U3.22-201ENST00000391120 215 ntBASIC8.61□□□□□ -1.03
TOP2AP11388 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.61□□□□□ -1.03
TOP2AP11388 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC8.61□□□□□ -1.03
TOP2AP11388 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.61□□□□□ -1.03
TOP2AP11388 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC8.61□□□□□ -1.03
TOP2AP11388 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.61□□□□□ -1.03
TOP2AP11388 AC073091.2-201ENST00000603205 907 ntBASIC8.61□□□□□ -1.03
TOP2AP11388 AC115286.1-201ENST00000604298 434 ntBASIC8.61□□□□□ -1.03
TOP2AP11388 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TOP2AP11388 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.61□□□□□ -1.03
TOP2AP11388 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TOP2AP11388 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TOP2AP11388 AC008758.3-201ENST00000507003 1829 ntBASIC8.61□□□□□ -1.03
TOP2AP11388 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TOP2AP11388 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.61□□□□□ -1.03
TOP2AP11388 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.61□□□□□ -1.03
TOP2AP11388 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
TOP2AP11388 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC8.6□□□□□ -1.03
TOP2AP11388 CENPIP1-201ENST00000425713 902 ntBASIC8.6□□□□□ -1.03
TOP2AP11388 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.6□□□□□ -1.03
TOP2AP11388 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.6□□□□□ -1.03
TOP2AP11388 AC021193.1-201ENST00000511607 420 ntBASIC8.6□□□□□ -1.03
TOP2AP11388 AC068831.4-201ENST00000556118 109 ntBASIC8.6□□□□□ -1.03
TOP2AP11388 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 AC007497.1-201ENST00000610421 561 ntBASIC8.6□□□□□ -1.03
TOP2AP11388 AC006338.2-201ENST00000616864 791 ntBASIC8.6□□□□□ -1.03
TOP2AP11388 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TOP2AP11388 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 LDHA-225ENST00000625635 141 ntTSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOP2AP11388 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.6□□□□□ -1.03
TOP2AP11388 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOP2AP11388 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
TOP2AP11388 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOP2AP11388 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOP2AP11388 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TOP2AP11388 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TOP2AP11388 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOP2AP11388 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms