Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 U3.23-201ENST00000391132 200 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC007394.1-201ENST00000421941 531 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC007161.1-204ENST00000423039 460 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC093084.1-201ENST00000424233 687 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 SETP10-201ENST00000424368 814 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 MTND2P40-201ENST00000436718 841 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 PTMAP6-201ENST00000439110 327 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC004815.1-201ENST00000484185 331 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC072052.1-201ENST00000496556 306 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC021087.2-201ENST00000504656 1203 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC022832.1-201ENST00000530718 645 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 MTCO2P22-201ENST00000603246 681 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AP004372.1-201ENST00000604842 844 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC004241.3-201ENST00000611728 517 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AC092159.4-201ENST00000624944 550 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAB40ALP0C0E4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC107021.2-201ENST00000567714 2095 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC024341.1-201ENST00000526444 1552 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RN7SKP185-201ENST00000362813 326 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RNA5SP507-201ENST00000363603 121 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 MIR137-201ENST00000385223 102 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RNA5SP339-201ENST00000390987 122 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC005042.1-201ENST00000393397 800 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 GAPDHP15-201ENST00000398586 975 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RNU2-22P-201ENST00000411266 212 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RPL23AP27-201ENST00000415161 451 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 FAM96AP1-201ENST00000430879 482 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RPS27P18-201ENST00000431701 247 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RPS11P7-201ENST00000442125 465 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC245517.2-201ENST00000442890 346 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RPL12P39-201ENST00000455456 496 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RN7SL329P-201ENST00000467740 299 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 RPEP1-201ENST00000504507 658 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 HMGB1P44-201ENST00000508597 572 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AC093770.1-201ENST00000511559 571 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 HMGB1P40-201ENST00000525121 540 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 HMGN2P6-201ENST00000551091 273 ntBASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB40ALP0C0E4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms