Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 AC011944.2-201ENST00000624440 683 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.58□□□□□ -1.36
COL5A2P05997 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.58□□□□□ -1.36
COL5A2P05997 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL5A2P05997 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL5A2P05997 AL359955.1-201ENST00000455242 3275 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL5A2P05997 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.58□□□□□ -1.36
COL5A2P05997 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL5A2P05997 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A2P05997 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A2P05997 MAPK10-263ENST00000641052 4307 ntBASIC6.57□□□□□ -1.36
COL5A2P05997 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL5A2P05997 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
COL5A2P05997 RNA5SP223-201ENST00000365174 120 ntBASIC6.57□□□□□ -1.36
COL5A2P05997 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A2P05997 BX679664.2-201ENST00000439282 283 ntBASIC6.57□□□□□ -1.36
COL5A2P05997 PPIAP21-201ENST00000464473 501 ntBASIC6.57□□□□□ -1.36
COL5A2P05997 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.57□□□□□ -1.36
COL5A2P05997 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A2P05997 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.57□□□□□ -1.36
COL5A2P05997 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.57□□□□□ -1.36
COL5A2P05997 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.57□□□□□ -1.36
COL5A2P05997 AL109618.2-201ENST00000605527 211 ntBASIC6.57□□□□□ -1.36
COL5A2P05997 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A2P05997 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A2P05997 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A2P05997 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 ECM1P2-201ENST00000503354 1577 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 AL117378.2-201ENST00000622916 1337 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A2P05997 IGKV7-3-201ENST00000357453 298 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL5A2P05997 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL5A2P05997 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A2P05997 RPL17P36-201ENST00000420302 549 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 RPEP3-201ENST00000425462 676 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 AC016831.4-201ENST00000438302 307 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 RPS17P2-201ENST00000461663 408 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A2P05997 RN7SL441P-201ENST00000492388 296 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A2P05997 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A2P05997 MIR1254-2-201ENST00000579553 63 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 AP001267.4-201ENST00000602598 545 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 AC093765.1-201ENST00000603758 881 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A2P05997 AC010632.3-201ENST00000611377 369 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 AC245389.2-201ENST00000616023 576 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 AC242843.1-201ENST00000618702 573 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A2P05997 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL5A2P05997 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.56□□□□□ -1.36
COL5A2P05997 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
COL5A2P05997 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A2P05997 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A2P05997 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL5A2P05997 MTCO1P15-201ENST00000529569 1526 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A2P05997 RNA5SP447-201ENST00000363749 119 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 RN7SKP27-201ENST00000410684 333 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A2P05997 AC090804.1-201ENST00000448870 490 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 AC093824.1-201ENST00000508796 343 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 AC026402.1-201ENST00000513642 170 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A2P05997 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A2P05997 AC018558.5-201ENST00000565840 952 ntBASIC6.55□□□□□ -1.36
COL5A2P05997 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.55□□□□□ -1.36
COL5A2P05997 AC087821.1-201ENST00000623639 567 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms