Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.39□□□□□ -1.71
CD74P04233 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.39□□□□□ -1.71
CD74P04233 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.39□□□□□ -1.71
CD74P04233 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.39□□□□□ -1.71
CD74P04233 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.39□□□□□ -1.71
CD74P04233 RNF138P2-201ENST00000603490 592 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC108865.2-201ENST00000606881 432 ntBASIC4.39□□□□□ -1.71
CD74P04233 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.39□□□□□ -1.71
CD74P04233 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.39□□□□□ -1.71
CD74P04233 AC015982.1-201ENST00000608113 465 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC118658.2-201ENST00000618697 459 ntBASIC4.39□□□□□ -1.71
CD74P04233 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CD74P04233 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CD74P04233 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.39□□□□□ -1.71
CD74P04233 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.39□□□□□ -1.71
CD74P04233 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CD74P04233 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CD74P04233 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CD74P04233 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CD74P04233 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.38□□□□□ -1.71
CD74P04233 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 MIR323B-201ENST00000385269 82 ntBASIC4.38□□□□□ -1.71
CD74P04233 RNU6-1320P-201ENST00000390838 107 ntBASIC4.38□□□□□ -1.71
CD74P04233 RNU6-1269P-201ENST00000391139 107 ntBASIC4.38□□□□□ -1.71
CD74P04233 AC092642.1-201ENST00000392417 425 ntBASIC4.38□□□□□ -1.71
CD74P04233 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 RN7SKP247-201ENST00000411094 308 ntBASIC4.38□□□□□ -1.71
CD74P04233 EIF4A1P1-201ENST00000420241 934 ntBASIC4.38□□□□□ -1.71
CD74P04233 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.38□□□□□ -1.71
CD74P04233 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.38□□□□□ -1.71
CD74P04233 AC110602.1-201ENST00000437414 318 ntBASIC4.38□□□□□ -1.71
CD74P04233 AL138787.1-202ENST00000437804 898 ntBASIC4.38□□□□□ -1.71
CD74P04233 DNAJA1P5-201ENST00000440278 943 ntBASIC4.38□□□□□ -1.71
CD74P04233 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.38□□□□□ -1.71
CD74P04233 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.38□□□□□ -1.71
CD74P04233 RNU6-599P-201ENST00000459383 107 ntBASIC4.38□□□□□ -1.71
CD74P04233 RNU6-1193P-201ENST00000459461 107 ntBASIC4.38□□□□□ -1.71
CD74P04233 AP000942.1-201ENST00000463969 747 ntBASIC4.38□□□□□ -1.71
CD74P04233 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.38□□□□□ -1.71
CD74P04233 RNU6-943P-201ENST00000516960 98 ntBASIC4.38□□□□□ -1.71
CD74P04233 IGKV2-4-201ENST00000523070 340 ntBASIC4.38□□□□□ -1.71
CD74P04233 YWHABP2-201ENST00000540201 713 ntBASIC4.38□□□□□ -1.71
CD74P04233 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.38□□□□□ -1.71
CD74P04233 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.38□□□□□ -1.71
CD74P04233 IGBP1P1-201ENST00000554337 1009 ntBASIC4.38□□□□□ -1.71
CD74P04233 CYCSP38-201ENST00000559840 322 ntBASIC4.38□□□□□ -1.71
CD74P04233 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.38□□□□□ -1.71
CD74P04233 AL138895.2-201ENST00000603019 178 ntBASIC4.38□□□□□ -1.71
CD74P04233 AC091167.5-201ENST00000605689 894 ntBASIC4.38□□□□□ -1.71
CD74P04233 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.38□□□□□ -1.71
CD74P04233 RNU6-368P-201ENST00000620928 107 ntBASIC4.38□□□□□ -1.71
CD74P04233 RNU6-538P-201ENST00000622329 107 ntBASIC4.38□□□□□ -1.71
CD74P04233 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.38□□□□□ -1.71
CD74P04233 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CD74P04233 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.38□□□□□ -1.71
CD74P04233 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.38□□□□□ -1.71
CD74P04233 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
CD74P04233 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CD74P04233 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.38□□□□□ -1.71
CD74P04233 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD74P04233 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD74P04233 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CD74P04233 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.37□□□□□ -1.71
CD74P04233 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD74P04233 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CD74P04233 AC004386.1-201ENST00000393214 761 ntBASIC4.37□□□□□ -1.71
CD74P04233 RN7SKP199-201ENST00000410325 305 ntBASIC4.37□□□□□ -1.71
CD74P04233 AC013470.3-201ENST00000420252 1194 ntBASIC4.37□□□□□ -1.71
CD74P04233 AL133173.1-201ENST00000423458 397 ntBASIC4.37□□□□□ -1.71
CD74P04233 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.37□□□□□ -1.71
CD74P04233 AC115283.1-201ENST00000427353 400 ntBASIC4.37□□□□□ -1.71
CD74P04233 COX6CP13-201ENST00000428703 226 ntBASIC4.37□□□□□ -1.71
CD74P04233 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.37□□□□□ -1.71
CD74P04233 RPS26P4-201ENST00000431743 355 ntBASIC4.37□□□□□ -1.71
CD74P04233 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.37□□□□□ -1.71
CD74P04233 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.37□□□□□ -1.71
CD74P04233 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CD74P04233 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CD74P04233 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CD74P04233 AC020890.1-201ENST00000491837 504 ntBASIC4.37□□□□□ -1.71
CD74P04233 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.37□□□□□ -1.71
CD74P04233 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.37□□□□□ -1.71
CD74P04233 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.37□□□□□ -1.71
CD74P04233 RNA5SP249-201ENST00000516127 99 ntBASIC4.37□□□□□ -1.71
CD74P04233 HMGB1P19-201ENST00000517578 577 ntBASIC4.37□□□□□ -1.71
CD74P04233 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.37□□□□□ -1.71
CD74P04233 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms