Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 OR2AO1P-201ENST00000476497 403 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.83□□□□□ -1.64
UPK1AO00322 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.83□□□□□ -1.64
UPK1AO00322 AGGF1P9-201ENST00000561884 913 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.83□□□□□ -1.64
UPK1AO00322 BNIP3P35-201ENST00000604530 490 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.83□□□□□ -1.64
UPK1AO00322 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
UPK1AO00322 AC063976.2-201ENST00000425667 3556 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
UPK1AO00322 AL138820.1-201ENST00000617901 5305 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 MTCO1P7-201ENST00000419523 1542 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1AO00322 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 MIR600-201ENST00000385007 98 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
UPK1AO00322 AL078599.1-201ENST00000402075 293 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 AL035079.1-201ENST00000405210 287 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 AL391361.1-201ENST00000405580 489 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1AO00322 AC079355.1-201ENST00000421770 223 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 AC012519.1-201ENST00000424588 610 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 OR52B5P-201ENST00000435337 951 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1AO00322 AC020779.1-201ENST00000478757 796 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1AO00322 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.82□□□□□ -1.64
UPK1AO00322 RPL7L1P4-201ENST00000513004 707 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
UPK1AO00322 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1AO00322 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1AO00322 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UPK1AO00322 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1AO00322 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.82□□□□□ -1.64
UPK1AO00322 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1AO00322 AP000864.1-201ENST00000609424 650 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 MIR6768-201ENST00000610734 72 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1AO00322 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.82□□□□□ -1.64
UPK1AO00322 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.82□□□□□ -1.64
UPK1AO00322 OR52B5P-202ENST00000641118 1110 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UPK1AO00322 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPK1AO00322 AL449283.1-201ENST00000602631 3403 ntBASIC4.82□□□□□ -1.64
UPK1AO00322 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.82□□□□□ -1.64
UPK1AO00322 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.82□□□□□ -1.64
UPK1AO00322 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1AO00322 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1AO00322 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 RNU1-43P-201ENST00000365052 165 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 RN7SKP97-201ENST00000410966 333 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 RPS26P4-201ENST00000431743 355 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1AO00322 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 AC009127.1-201ENST00000467090 155 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1AO00322 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1AO00322 OR4A46P-201ENST00000527255 933 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 AC024940.3-201ENST00000538551 316 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1AO00322 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.81□□□□□ -1.64
UPK1AO00322 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.81□□□□□ -1.64
UPK1AO00322 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1AO00322 MIR3176-201ENST00000582210 90 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.81□□□□□ -1.64
UPK1AO00322 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.81□□□□□ -1.64
UPK1AO00322 AL512329.2-201ENST00000607350 548 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 AP005432.2-201ENST00000608162 586 ntBASIC4.81□□□□□ -1.64
UPK1AO00322 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
UPK1AO00322 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UPK1AO00322 PANDAR-201ENST00000629595 1506 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms