Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RHBDD3Q9Y3P4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AL121950.1-201ENST00000624993 2077 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 RNU6-178P-201ENST00000384631 104 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 HMGN1P36-201ENST00000446623 298 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 RPS4XP12-201ENST00000461747 709 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC074087.1-201ENST00000512059 724 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC008521.2-201ENST00000591021 259 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 RN7SL787P-201ENST00000613000 284 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AC103703.1-201ENST00000634783 663 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 SMG1P6-201ENST00000532337 2930 ntBASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDD3Q9Y3P4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 AL022322.2-201ENST00000624072 20397 ntBASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 NXF4-202ENST00000416098 1465 ntBASIC4.65□□□□□ -1.66
RHBDD3Q9Y3P4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 OOSP1-201ENST00000398992 1270 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 RN7SKP16-201ENST00000410180 299 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 RN7SKP247-201ENST00000411094 308 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 SDHDP6-201ENST00000414693 480 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 Z93019.1-201ENST00000416450 973 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 VN1R3-201ENST00000418822 919 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC124944.2-201ENST00000429866 1242 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 RPL12P17-201ENST00000432393 498 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AL035551.1-201ENST00000446931 348 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AL157385.1-201ENST00000446973 268 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 RPL31P15-201ENST00000449770 338 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 YWHAEP1-201ENST00000453697 763 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 RPL10P17-201ENST00000453852 316 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC092754.1-201ENST00000472975 479 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 SCARNA16.4-201ENST00000516956 187 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC078878.1-201ENST00000539832 958 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 FO393422.1-201ENST00000603908 708 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC015982.1-201ENST00000608113 465 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC127024.6-201ENST00000621598 424 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms