Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC004158.1-201ENST00000564508 4319 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AL132640.2-201ENST00000559968 1698 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 MSL3P1-202ENST00000440028 1468 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 BX510359.2-201ENST00000417920 305 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 RPS27AP7-201ENST00000422792 455 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 OR52J1P-201ENST00000450596 932 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 snoU13.1-201ENST00000459157 104 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 RN7SL197P-201ENST00000466981 299 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AC012339.2-201ENST00000523996 453 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AC020910.3-201ENST00000603701 874 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 AL138960.1-201ENST00000613838 513 ntBASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.55□□□□□ -1.2
SHANK2Q9UPX8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 RNA5SP515-201ENST00000364570 118 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AL021331.1-201ENST00000402817 582 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AC122718.1-201ENST00000439448 744 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AC000111.2-201ENST00000448200 210 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 SLC25A18P1-201ENST00000449385 454 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 FAM133DP-201ENST00000464802 691 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AC006967.1-201ENST00000467608 589 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 OR2A3P-201ENST00000493774 953 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 SCARNA22-201ENST00000503991 125 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AC019322.1-201ENST00000571869 389 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 AL031123.3-201ENST00000623345 1837 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.54□□□□□ -1.2
SHANK2Q9UPX8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 SNORA48.7-201ENST00000391302 135 ntBASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 RPS3AP23-201ENST00000401762 784 ntBASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AL390316.1-201ENST00000406279 553 ntBASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AF186996.5-201ENST00000418098 904 ntBASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC234779.1-201ENST00000425910 285 ntBASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC116562.1-201ENST00000485355 781 ntBASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC011005.3-201ENST00000491624 395 ntBASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHANK2Q9UPX8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.52□□□□□ -1.2
SHANK2Q9UPX8 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SHANK2Q9UPX8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms