Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HLA-CQ95604 RNU1-65P-201ENST00000363919 148 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 RNU6-282P-201ENST00000365357 103 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 RNA5SP280-201ENST00000411230 115 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-CQ95604 RPL18AP14-201ENST00000417685 526 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC092634.6-201ENST00000418558 192 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 PTPN2P1-201ENST00000423212 1072 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 CACYBPP1-201ENST00000438592 684 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC092601.1-201ENST00000444526 383 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AL031736.1-201ENST00000449688 618 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 MED28P7-201ENST00000456611 530 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 RPL5P12-201ENST00000477071 851 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC021146.2-201ENST00000504736 556 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 SNORA48.10-201ENST00000516965 160 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 RNU6-264P-201ENST00000517134 104 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-CQ95604 PDCD5P1-201ENST00000543528 309 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 MIR212-201ENST00000586026 110 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC090236.2-201ENST00000587933 1101 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-CQ95604 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.77□□□□□ -1.17
HLA-CQ95604 VN1R107P-201ENST00000601784 209 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 7SK.7-201ENST00000603504 247 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC010591.1-201ENST00000603941 649 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AL096855.2-201ENST00000605785 369 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AL442067.1-201ENST00000613261 223 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-CQ95604 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 uc_338.21-201ENST00000622458 147 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AL732618.1-201ENST00000623251 301 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 AC140479.4-205ENST00000636339 820 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-CQ95604 MAPK10-290ENST00000641237 2826 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-CQ95604 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 AC138207.6-201ENST00000579164 1967 ntBASIC7.77□□□□□ -1.17
HLA-CQ95604 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-CQ95604 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-CQ95604 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC007823.1-201ENST00000569932 1566 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 MKI67P1-201ENST00000604297 1460 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 AP002833.3-201ENST00000625075 2265 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 LINC02035-201ENST00000610128 5476 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
HLA-CQ95604 RNU6-359P-201ENST00000365466 108 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 SNORA69-201ENST00000383895 132 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 RNU6-532P-201ENST00000384318 107 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 RNU6-769P-201ENST00000384407 104 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 SUMO2P13-201ENST00000403109 272 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AL133260.1-201ENST00000405720 405 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 MIR320C1-201ENST00000408566 88 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 RNU2-39P-201ENST00000410604 198 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 NAP1L1P2-201ENST00000414182 1089 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-CQ95604 NUP35P1-201ENST00000422734 947 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 FTLP17-201ENST00000432567 525 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms