Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RN7SKP238-201ENST00000516483 249 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 MIR4301-201ENST00000577203 66 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 MIR4675-201ENST00000577898 77 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC022662.1-201ENST00000580252 331 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC067852.5-201ENST00000589299 310 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC068768.2-201ENST00000602352 343 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AC126175.1-201ENST00000617041 758 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 AL512652.1-201ENST00000619006 500 ntBASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SYNPOQ8N3V7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 AL033543.1-201ENST00000623440 13454 ntBASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 ZNF658B-201ENST00000602828 3408 ntBASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
SYNPOQ8N3V7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 RNA5SP350-201ENST00000363298 111 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 OR1L1-202ENST00000373686 1083 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 RNU6-83P-201ENST00000384568 112 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC079355.1-201ENST00000421770 223 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 RPL12P12-201ENST00000424633 501 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AL031663.1-201ENST00000437445 219 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AL035551.1-201ENST00000446931 348 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 MRPL42P4-201ENST00000453267 443 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ART2BP-201ENST00000453501 499 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 MRPL35P4-201ENST00000453682 566 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 RPS3AP22-201ENST00000488297 769 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 IGBP1P5-201ENST00000507524 1000 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 OR5H4P-201ENST00000510851 923 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC010486.3-201ENST00000511602 785 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 SCARNA18.1-201ENST00000516330 83 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 IGKV1D-22-201ENST00000518953 324 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 IGHV3-57-201ENST00000520143 280 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC010306.1-201ENST00000523223 1117 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 MTND2P26-201ENST00000528255 1029 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC092747.2-201ENST00000545069 983 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC068790.7-201ENST00000602347 528 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AL109653.1-201ENST00000603091 248 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AC008555.7-201ENST00000605008 583 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 YES1P1-201ENST00000418510 1628 ntBASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SYNPOQ8N3V7 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNPOQ8N3V7 TNPO1P2-201ENST00000426249 2665 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms