Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AL354854.1-201ENST00000455940 1363 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AL365475.1-201ENST00000565135 1949 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AL158163.1-201ENST00000603915 1649 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 MTCO1P14-201ENST00000441695 1559 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC138409.1-201ENST00000505001 3598 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 ENSAP3-201ENST00000312710 333 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 RNU1-11P-201ENST00000383975 164 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 Y_RNA.461-201ENST00000384263 103 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 Y_RNA.463-201ENST00000384271 102 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 Y_RNA.477-201ENST00000384352 108 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 RNU6-1300P-201ENST00000391046 108 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 PCNPP3-201ENST00000393579 471 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 RNU2-9P-201ENST00000410194 145 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 RPL12P10-201ENST00000413498 498 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC062016.2-201ENST00000420950 676 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 Z93242.1-201ENST00000427102 353 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 SKP1P3-201ENST00000429280 487 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 RPEP2-201ENST00000432149 701 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC003989.1-201ENST00000434569 565 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 MGAT2P1-201ENST00000449718 797 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 MTND3P16-201ENST00000452205 344 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 HMGB1P15-201ENST00000453854 435 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 RNU7-63P-201ENST00000459054 62 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 RN7SL414P-201ENST00000469545 294 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 RN7SL647P-201ENST00000485429 300 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC097263.1-201ENST00000496795 606 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AP003181.2-201ENST00000528941 181 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AL132640.2-202ENST00000559732 614 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 UBE2CP4-201ENST00000561405 535 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 EIF4EBP2P2-201ENST00000563883 333 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AF038458.1-201ENST00000588406 262 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC129492.5-201ENST00000603489 315 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC004792.1-201ENST00000614523 137 ntBASIC8.37□□□□□ -1.07
VARS2Q5ST30 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 AC091152.4-201ENST00000623480 3483 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARS2Q5ST30 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VARS2Q5ST30 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VARS2Q5ST30 Y_RNA.29-201ENST00000362570 113 ntBASIC8.36□□□□□ -1.07
VARS2Q5ST30 Y_RNA.462-201ENST00000384268 102 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms