Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC217777.1-201ENST00000570034 1471 ntBASIC5.32□□□□□ -1.56
CBX1P83916 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CBX1P83916 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 AC008549.2-201ENST00000333482 706 ntBASIC5.31□□□□□ -1.56
CBX1P83916 RNU6-1331P-201ENST00000363658 106 ntBASIC5.31□□□□□ -1.56
CBX1P83916 RNA5SP433-201ENST00000364491 114 ntBASIC5.31□□□□□ -1.56
CBX1P83916 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CBX1P83916 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.31□□□□□ -1.56
CBX1P83916 PRELID1P1-201ENST00000403549 660 ntBASIC5.31□□□□□ -1.56
CBX1P83916 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.31□□□□□ -1.56
CBX1P83916 PDSS1P1-201ENST00000422953 1114 ntBASIC5.31□□□□□ -1.56
CBX1P83916 AC093414.1-201ENST00000434712 514 ntBASIC5.31□□□□□ -1.56
CBX1P83916 RAB9AP5-201ENST00000437794 597 ntBASIC5.31□□□□□ -1.56
CBX1P83916 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 RAB9AP2-201ENST00000443911 597 ntBASIC5.31□□□□□ -1.56
CBX1P83916 AC044810.1-201ENST00000480271 711 ntBASIC5.31□□□□□ -1.56
CBX1P83916 AC098583.1-201ENST00000480875 255 ntBASIC5.31□□□□□ -1.56
CBX1P83916 AC005412.2-201ENST00000492004 341 ntBASIC5.31□□□□□ -1.56
CBX1P83916 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.31□□□□□ -1.56
CBX1P83916 AF186190.1-201ENST00000517470 480 ntBASIC5.31□□□□□ -1.56
CBX1P83916 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.31□□□□□ -1.56
CBX1P83916 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.31□□□□□ -1.56
CBX1P83916 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
CBX1P83916 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.31□□□□□ -1.56
CBX1P83916 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.31□□□□□ -1.56
CBX1P83916 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.31□□□□□ -1.56
CBX1P83916 AL512652.1-201ENST00000619006 500 ntBASIC5.31□□□□□ -1.56
CBX1P83916 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.31□□□□□ -1.56
CBX1P83916 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.31□□□□□ -1.56
CBX1P83916 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.31□□□□□ -1.56
CBX1P83916 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CBX1P83916 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.31□□□□□ -1.56
CBX1P83916 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CBX1P83916 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.31□□□□□ -1.56
CBX1P83916 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.31□□□□□ -1.56
CBX1P83916 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 ECM1P2-201ENST00000503354 1577 ntBASIC5.3□□□□□ -1.56
CBX1P83916 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 PANDAR-201ENST00000629595 1506 ntBASIC5.3□□□□□ -1.56
CBX1P83916 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 OR52B1P-201ENST00000316506 909 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AC005294.1-201ENST00000355509 281 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.3□□□□□ -1.56
CBX1P83916 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 AC233289.1-201ENST00000403700 508 ntBASIC5.3□□□□□ -1.56
CBX1P83916 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.3□□□□□ -1.56
CBX1P83916 AC004552.1-201ENST00000419089 348 ntBASIC5.3□□□□□ -1.56
CBX1P83916 PTP4A1P1-201ENST00000420539 515 ntBASIC5.3□□□□□ -1.56
CBX1P83916 RPS27P18-201ENST00000431701 247 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.3□□□□□ -1.56
CBX1P83916 ARAFP2-201ENST00000440565 559 ntBASIC5.3□□□□□ -1.56
CBX1P83916 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CBX1P83916 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.3□□□□□ -1.56
CBX1P83916 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 AC104339.1-201ENST00000465478 348 ntBASIC5.3□□□□□ -1.56
CBX1P83916 RPS26P3-201ENST00000470205 348 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AC090543.2-201ENST00000483963 348 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AC004057.1-201ENST00000485827 348 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AC117500.1-201ENST00000497352 755 ntBASIC5.3□□□□□ -1.56
CBX1P83916 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.3□□□□□ -1.56
CBX1P83916 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 MYL12AP1-201ENST00000518490 515 ntBASIC5.3□□□□□ -1.56
CBX1P83916 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.3□□□□□ -1.56
CBX1P83916 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.3□□□□□ -1.56
CBX1P83916 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.3□□□□□ -1.56
CBX1P83916 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.3□□□□□ -1.56
CBX1P83916 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.3□□□□□ -1.56
CBX1P83916 AL162431.4-201ENST00000604674 411 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AC067838.1-201ENST00000606064 577 ntBASIC5.3□□□□□ -1.56
CBX1P83916 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.3□□□□□ -1.56
CBX1P83916 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.3□□□□□ -1.56
CBX1P83916 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.3□□□□□ -1.56
CBX1P83916 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.3□□□□□ -1.56
CBX1P83916 AC011266.1-201ENST00000624119 3569 ntBASIC5.3□□□□□ -1.56
CBX1P83916 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CBX1P83916 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CBX1P83916 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CBX1P83916 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms