Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.55□□□□□ -1.68
HIST1H3AP68431 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H3AP68431 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HIST1H3AP68431 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
HIST1H3AP68431 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 MIR323A-201ENST00000362199 86 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 RNA5SP223-201ENST00000365174 120 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AL512422.1-201ENST00000407033 553 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 RN7SKP97-201ENST00000410966 333 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 CTSL3P-202ENST00000412179 788 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AC108075.1-201ENST00000424692 529 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 RPS29P10-201ENST00000439197 166 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 RPL12P11-201ENST00000439970 501 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 Z92846.1-201ENST00000456203 268 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 PGAM1P13-201ENST00000507497 754 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 MIR4310-201ENST00000582950 57 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 AP005432.2-201ENST00000608162 586 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 AC079395.2-201ENST00000610982 737 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 THAP12P5-201ENST00000405864 2275 ntBASIC4.54□□□□□ -1.68
HIST1H3AP68431 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H3AP68431 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H3AP68431 MUC2-202ENST00000613187 4845 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H3AP68431 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 ZNF652P1-201ENST00000442420 1309 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H3AP68431 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H3AP68431 SAMMSON-213ENST00000641336 1521 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 U3.2-201ENST00000362981 210 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 RN7SKP160-201ENST00000363804 340 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AL390316.1-201ENST00000406279 553 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 RN7SKP16-201ENST00000410180 299 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 CHEK2P5-201ENST00000423877 246 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 RPL7L1P9-201ENST00000431298 745 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 RPL7AP61-201ENST00000443410 636 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC005412.2-201ENST00000492004 341 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 BX510359.5-201ENST00000515651 304 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC134349.2-201ENST00000535136 910 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC006349.1-201ENST00000555526 235 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC127381.1-201ENST00000555979 939 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AL390726.5-202ENST00000564800 256 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 FKBP1AP1-201ENST00000594588 318 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 AL139407.1-201ENST00000613826 1175 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AL122125.1-201ENST00000616999 600 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H3AP68431 CASC19-264ENST00000641912 1184 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.53□□□□□ -1.68
HIST1H3AP68431 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H3AP68431 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H3AP68431 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
HIST1H3AP68431 CASC19-221ENST00000641309 1382 ntBASIC4.53□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms