Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCR4P61073 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCR4P61073 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCR4P61073 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCR4P61073 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CXCR4P61073 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCR4P61073 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CXCR4P61073 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCR4P61073 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CXCR4P61073 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CXCR4P61073 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCR4P61073 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CXCR4P61073 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.65
CXCR4P61073 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.71□□□□□ -1.66
CXCR4P61073 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CXCR4P61073 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.71□□□□□ -1.66
CXCR4P61073 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CXCR4P61073 RNA5SP433-201ENST00000364491 114 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 RN7SKP275-201ENST00000364626 301 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CXCR4P61073 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CXCR4P61073 OR2AT2P-201ENST00000413438 905 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 CDY8P-201ENST00000428380 1279 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCR4P61073 TMX2P1-201ENST00000436507 708 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCR4P61073 Z84478.1-201ENST00000438230 1219 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 SNRPFP2-201ENST00000440710 251 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 AC019185.1-201ENST00000442718 389 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 MRPL48P1-201ENST00000445390 636 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 EEF1B2P6-201ENST00000445713 673 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCR4P61073 CDY20P-201ENST00000447528 1279 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 AL445665.1-202ENST00000452436 324 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CXCR4P61073 RN7SL441P-201ENST00000492388 296 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCR4P61073 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCR4P61073 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCR4P61073 MIR4675-201ENST00000577898 77 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 AC067773.1-201ENST00000603284 1094 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCR4P61073 MIR6889-201ENST00000613185 59 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 AC008115.3-201ENST00000614874 549 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 MIR193BHG-214ENST00000641765 509 ntBASIC4.71□□□□□ -1.66
CXCR4P61073 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCR4P61073 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.71□□□□□ -1.66
CXCR4P61073 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCR4P61073 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CXCR4P61073 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCR4P61073 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CXCR4P61073 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 HSPA8P15-201ENST00000401676 786 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.7□□□□□ -1.66
CXCR4P61073 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCR4P61073 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 NMNAT1P2-201ENST00000435192 860 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 FMO7P-201ENST00000436045 768 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCR4P61073 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCR4P61073 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 EIF4E2P2-201ENST00000492033 736 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 TCP11X3P-202ENST00000514289 1254 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 NRBF2P4-201ENST00000520874 850 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCR4P61073 AL049872.1-201ENST00000556323 322 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.7□□□□□ -1.66
CXCR4P61073 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.7□□□□□ -1.66
CXCR4P61073 MIR5010-201ENST00000582846 120 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCR4P61073 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCR4P61073 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCR4P61073 AC073593.1-201ENST00000624500 411 ntBASIC4.7□□□□□ -1.66
CXCR4P61073 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CXCR4P61073 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCR4P61073 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCR4P61073 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CXCR4P61073 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms