Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCC3P46736 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
BRCC3P46736 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 RNA5SP453-201ENST00000362503 119 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 RN7SKP103-201ENST00000363848 320 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCC3P46736 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCC3P46736 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.51□□□□□ -1.53
BRCC3P46736 AL161722.2-201ENST00000434731 981 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AC023271.1-201ENST00000445936 1090 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 NDUFA5P8-201ENST00000449019 346 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AC020779.1-201ENST00000478757 796 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AC022133.1-201ENST00000490961 571 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCC3P46736 SEPT10P1-201ENST00000517342 1162 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.51□□□□□ -1.53
BRCC3P46736 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCC3P46736 AC090286.3-201ENST00000573133 187 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 FAM25E-202ENST00000608562 189 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCC3P46736 AC100827.5-201ENST00000615883 426 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AC091953.3-201ENST00000623220 236 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AC091905.4-201ENST00000623432 202 ntBASIC5.51□□□□□ -1.53
BRCC3P46736 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCC3P46736 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
BRCC3P46736 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCC3P46736 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
BRCC3P46736 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
BRCC3P46736 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCC3P46736 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCC3P46736 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCC3P46736 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCC3P46736 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCC3P46736 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCC3P46736 RN7SKP95-201ENST00000362860 303 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 RN7SKP145-201ENST00000363291 303 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 RN7SKP153-201ENST00000365026 316 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 RNU1-74P-201ENST00000384108 171 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 DDX39BP1-205ENST00000422507 192 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 AC009784.1-201ENST00000426484 460 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 AC104837.2-201ENST00000427236 424 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 VN1R96P-201ENST00000446052 858 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 RPS3AP41-201ENST00000462701 778 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 RN7SL814P-201ENST00000487715 300 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 COX6B1P2-201ENST00000489624 230 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCC3P46736 RN7SKP260-201ENST00000516907 149 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 AC022360.1-201ENST00000521058 340 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
BRCC3P46736 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCC3P46736 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.5□□□□□ -1.53
BRCC3P46736 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.5□□□□□ -1.53
BRCC3P46736 AP005432.2-201ENST00000608162 586 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 CASC19-221ENST00000641309 1382 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BRCC3P46736 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
BRCC3P46736 ADAM24P-201ENST00000398655 2101 ntBASIC5.5□□□□□ -1.53
BRCC3P46736 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCC3P46736 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
BRCC3P46736 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCC3P46736 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
BRCC3P46736 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCC3P46736 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
BRCC3P46736 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCC3P46736 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRCC3P46736 IRF5P1-201ENST00000504852 2164 ntBASIC5.49□□□□□ -1.53
BRCC3P46736 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRCC3P46736 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCC3P46736 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCC3P46736 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms