Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CKS2P33552 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.69□□□□□ -1.82
CKS2P33552 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CKS2P33552 AC087190.4-201ENST00000574616 8334 ntBASIC3.68□□□□□ -1.82
CKS2P33552 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.68□□□□□ -1.82
CKS2P33552 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.68□□□□□ -1.82
CKS2P33552 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.68□□□□□ -1.82
CKS2P33552 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 AC027279.1-201ENST00000568885 4284 ntBASIC3.68□□□□□ -1.82
CKS2P33552 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CKS2P33552 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CKS2P33552 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.68□□□□□ -1.82
CKS2P33552 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CKS2P33552 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.68□□□□□ -1.82
CKS2P33552 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CKS2P33552 RNU1-150P-201ENST00000362491 162 ntBASIC3.68□□□□□ -1.82
CKS2P33552 RNA5SP90-201ENST00000364801 99 ntBASIC3.68□□□□□ -1.82
CKS2P33552 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CKS2P33552 AL133388.1-201ENST00000404509 287 ntBASIC3.68□□□□□ -1.82
CKS2P33552 AL512422.1-201ENST00000407033 553 ntBASIC3.68□□□□□ -1.82
CKS2P33552 EIF4HP2-201ENST00000424380 563 ntBASIC3.68□□□□□ -1.82
CKS2P33552 ARL4AP3-201ENST00000441452 574 ntBASIC3.68□□□□□ -1.82
CKS2P33552 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 RHEBP2-201ENST00000450289 600 ntBASIC3.68□□□□□ -1.82
CKS2P33552 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC3.68□□□□□ -1.82
CKS2P33552 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.68□□□□□ -1.82
CKS2P33552 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.68□□□□□ -1.82
CKS2P33552 AC109481.1-201ENST00000509173 282 ntBASIC3.68□□□□□ -1.82
CKS2P33552 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.68□□□□□ -1.82
CKS2P33552 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.68□□□□□ -1.82
CKS2P33552 SNORA43.3-201ENST00000517240 103 ntBASIC3.68□□□□□ -1.82
CKS2P33552 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.68□□□□□ -1.82
CKS2P33552 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.68□□□□□ -1.82
CKS2P33552 AP002373.2-201ENST00000541631 1060 ntBASIC3.68□□□□□ -1.82
CKS2P33552 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.68□□□□□ -1.82
CKS2P33552 AP001496.3-201ENST00000580230 913 ntBASIC3.68□□□□□ -1.82
CKS2P33552 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.68□□□□□ -1.82
CKS2P33552 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.68□□□□□ -1.82
CKS2P33552 MIR6883-201ENST00000614952 78 ntBASIC3.68□□□□□ -1.82
CKS2P33552 uc_338.29-201ENST00000615099 168 ntBASIC3.68□□□□□ -1.82
CKS2P33552 AC132068.1-201ENST00000623805 459 ntBASIC3.68□□□□□ -1.82
CKS2P33552 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.68□□□□□ -1.82
CKS2P33552 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC3.68□□□□□ -1.82
CKS2P33552 AL596275.2-207ENST00000641188 675 ntBASIC3.68□□□□□ -1.82
CKS2P33552 AL596275.2-204ENST00000641628 552 ntBASIC3.68□□□□□ -1.82
CKS2P33552 AL596275.2-206ENST00000641957 626 ntBASIC3.68□□□□□ -1.82
CKS2P33552 UGT2B26P-201ENST00000508672 1613 ntBASIC3.68□□□□□ -1.82
CKS2P33552 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CKS2P33552 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
CKS2P33552 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CKS2P33552 XKRY2-202ENST00000623874 1581 ntBASIC3.68□□□□□ -1.82
CKS2P33552 XKRY-202ENST00000624960 1581 ntBASIC3.68□□□□□ -1.82
CKS2P33552 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CKS2P33552 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CKS2P33552 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.67□□□□□ -1.82
CKS2P33552 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.67□□□□□ -1.82
CKS2P33552 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CKS2P33552 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.67□□□□□ -1.82
CKS2P33552 IL6STP1-201ENST00000346911 1020 ntBASIC3.67□□□□□ -1.82
CKS2P33552 RNA5SP477-201ENST00000362639 119 ntBASIC3.67□□□□□ -1.82
CKS2P33552 RN7SKP113-201ENST00000363891 295 ntBASIC3.67□□□□□ -1.82
CKS2P33552 RNA5SP232-201ENST00000364144 119 ntBASIC3.67□□□□□ -1.82
CKS2P33552 RNA5SP394-201ENST00000364216 119 ntBASIC3.67□□□□□ -1.82
CKS2P33552 SNORA2.3-201ENST00000383920 135 ntBASIC3.67□□□□□ -1.82
CKS2P33552 MIR551B-201ENST00000384984 96 ntBASIC3.67□□□□□ -1.82
CKS2P33552 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CKS2P33552 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CKS2P33552 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CKS2P33552 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.67□□□□□ -1.82
CKS2P33552 AC009237.10-201ENST00000414112 510 ntBASIC3.67□□□□□ -1.82
CKS2P33552 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.67□□□□□ -1.82
CKS2P33552 AC234781.4-201ENST00000419384 244 ntBASIC3.67□□□□□ -1.82
CKS2P33552 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CKS2P33552 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.67□□□□□ -1.82
CKS2P33552 AC104843.2-201ENST00000427666 297 ntBASIC3.67□□□□□ -1.82
CKS2P33552 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC3.67□□□□□ -1.82
CKS2P33552 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.67□□□□□ -1.82
CKS2P33552 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.67□□□□□ -1.82
CKS2P33552 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.67□□□□□ -1.82
CKS2P33552 AL512637.1-201ENST00000439523 1231 ntBASIC3.67□□□□□ -1.82
CKS2P33552 ARAFP2-201ENST00000440565 559 ntBASIC3.67□□□□□ -1.82
CKS2P33552 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.67□□□□□ -1.82
CKS2P33552 AL589765.3-201ENST00000446084 462 ntBASIC3.67□□□□□ -1.82
CKS2P33552 AC073587.1-201ENST00000447093 876 ntBASIC3.67□□□□□ -1.82
CKS2P33552 AL591363.1-201ENST00000450091 483 ntBASIC3.67□□□□□ -1.82
CKS2P33552 RN7SL443P-201ENST00000464331 290 ntBASIC3.67□□□□□ -1.82
CKS2P33552 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CKS2P33552 MTCO1P55-201ENST00000489829 745 ntBASIC3.67□□□□□ -1.82
CKS2P33552 SNRPCP11-201ENST00000492453 205 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms