Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL4A5P29400 AC138701.1-201ENST00000524329 714 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A5P29400 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A5P29400 AL020997.2-201ENST00000602607 184 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A5P29400 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A5P29400 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 AP000547.3-204ENST00000588548 2523 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 AC100871.1-201ENST00000507871 1456 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
COL4A5P29400 RNA5SP28-201ENST00000363841 119 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A5P29400 MIR134-201ENST00000385258 73 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 GAPDHP49-201ENST00000421421 961 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.94□□□□□ -1.46
COL4A5P29400 AC016831.4-201ENST00000438302 307 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL4A5P29400 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.94□□□□□ -1.46
COL4A5P29400 AC022360.1-201ENST00000521058 340 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 AC100784.1-201ENST00000522790 310 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.94□□□□□ -1.46
COL4A5P29400 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A5P29400 AC008782.1-201ENST00000603386 430 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 AC007497.1-201ENST00000610421 561 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 AL121890.3-201ENST00000618494 516 ntBASIC5.94□□□□□ -1.46
COL4A5P29400 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL4A5P29400 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A5P29400 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
COL4A5P29400 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A5P29400 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL4A5P29400 AL731532.1-201ENST00000623972 4236 ntBASIC5.93□□□□□ -1.46
COL4A5P29400 AL117378.2-201ENST00000622916 1337 ntBASIC5.93□□□□□ -1.46
COL4A5P29400 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.93□□□□□ -1.46
COL4A5P29400 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.93□□□□□ -1.46
COL4A5P29400 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 SNORA37-201ENST00000384504 129 ntBASIC5.93□□□□□ -1.46
COL4A5P29400 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A5P29400 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL4A5P29400 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A5P29400 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL4A5P29400 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A5P29400 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A5P29400 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A5P29400 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A5P29400 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A5P29400 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A5P29400 FAM27B-201ENST00000610601 213 ntBASIC5.93□□□□□ -1.46
COL4A5P29400 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A5P29400 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
COL4A5P29400 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A5P29400 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 AC063976.2-201ENST00000425667 3556 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL4A5P29400 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL4A5P29400 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL4A5P29400 AL390316.1-201ENST00000406279 553 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 U3.32-201ENST00000408116 212 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A5P29400 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A5P29400 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A5P29400 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A5P29400 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A5P29400 PSAT1P4-201ENST00000466500 526 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 RN7SL441P-201ENST00000492388 296 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 OR2A3P-201ENST00000493774 953 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A5P29400 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A5P29400 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 AL049839.1-201ENST00000556151 657 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 BNIP3P5-201ENST00000562290 498 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms