Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 AL121932.1-201ENST00000605542 214 ntBASIC3.04□□□□□ -1.92
APOBP04114 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 NSF-206ENST00000575068 2667 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 AC073365.1-203ENST00000641055 1992 ntBASIC3.04□□□□□ -1.92
APOBP04114 AL731566.1-201ENST00000620490 1937 ntBASIC3.04□□□□□ -1.92
APOBP04114 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
APOBP04114 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 snoU13.24-201ENST00000458998 104 ntBASIC3.04□□□□□ -1.92
APOBP04114 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 RPS27AP16-201ENST00000492222 470 ntBASIC3.04□□□□□ -1.92
APOBP04114 HMGN1P9-201ENST00000515212 298 ntBASIC3.04□□□□□ -1.92
APOBP04114 AC022360.1-201ENST00000521058 340 ntBASIC3.04□□□□□ -1.92
APOBP04114 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC3.04□□□□□ -1.92
APOBP04114 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 AC008739.3-201ENST00000603262 127 ntBASIC3.04□□□□□ -1.92
APOBP04114 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 AC004777.1-201ENST00000624317 287 ntBASIC3.04□□□□□ -1.92
APOBP04114 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC3.03□□□□□ -1.92
APOBP04114 RNU1-130P-201ENST00000363930 160 ntBASIC3.03□□□□□ -1.92
APOBP04114 TRAV35-201ENST00000390462 330 ntBASIC3.03□□□□□ -1.92
APOBP04114 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC3.03□□□□□ -1.92
APOBP04114 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC3.03□□□□□ -1.92
APOBP04114 NRBF2P3-201ENST00000432731 865 ntBASIC3.03□□□□□ -1.92
APOBP04114 AL450023.3-201ENST00000440592 271 ntBASIC3.03□□□□□ -1.92
APOBP04114 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.03□□□□□ -1.92
APOBP04114 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 RPS5P7-201ENST00000456664 608 ntBASIC3.03□□□□□ -1.92
APOBP04114 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.03□□□□□ -1.92
APOBP04114 RN7SL443P-201ENST00000464331 290 ntBASIC3.03□□□□□ -1.92
APOBP04114 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC3.03□□□□□ -1.92
APOBP04114 AP000619.2-201ENST00000546014 969 ntBASIC3.03□□□□□ -1.92
APOBP04114 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 AL161756.2-201ENST00000604597 246 ntBASIC3.03□□□□□ -1.92
APOBP04114 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.03□□□□□ -1.92
APOBP04114 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 AC093578.1-201ENST00000415219 368 ntBASIC3.03□□□□□ -1.92
APOBP04114 SALL4P2-201ENST00000423288 2910 ntBASIC3.03□□□□□ -1.92
APOBP04114 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.03□□□□□ -1.92
APOBP04114 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
APOBP04114 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 NHS-204ENST00000615422 8860 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 RPL11P3-201ENST00000395256 523 ntBASIC3.03□□□□□ -1.92
APOBP04114 AL136116.2-201ENST00000404020 785 ntBASIC3.03□□□□□ -1.92
APOBP04114 GLUD1P9-201ENST00000420997 1173 ntBASIC3.03□□□□□ -1.92
APOBP04114 AL353748.1-201ENST00000440753 474 ntBASIC3.03□□□□□ -1.92
APOBP04114 RPL7P41-201ENST00000485823 957 ntBASIC3.03□□□□□ -1.92
APOBP04114 ENPP7P11-201ENST00000505915 627 ntBASIC3.03□□□□□ -1.92
APOBP04114 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
APOBP04114 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms