Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A1P02462 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A1P02462 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A1P02462 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 RNA5SP479-201ENST00000364858 117 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 AL049693.1-201ENST00000402760 611 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 RNU4-25P-201ENST00000410569 230 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 DNAJC19P7-201ENST00000428811 344 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 AC097523.2-201ENST00000435551 652 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A1P02462 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.01□□□□□ -1.45
COL4A1P02462 RN7SL385P-201ENST00000468873 276 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A1P02462 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 AC007497.1-201ENST00000610421 561 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 AL442639.1-201ENST00000625030 1899 ntBASIC6□□□□□ -1.45
COL4A1P02462 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6□□□□□ -1.45
COL4A1P02462 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
COL4A1P02462 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6□□□□□ -1.45
COL4A1P02462 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 AC068446.1-201ENST00000556425 1549 ntBASIC6□□□□□ -1.45
COL4A1P02462 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 AL592148.3-201ENST00000608771 2646 ntBASIC6□□□□□ -1.45
COL4A1P02462 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 AC114755.2-201ENST00000413520 361 ntBASIC6□□□□□ -1.45
COL4A1P02462 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
COL4A1P02462 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6□□□□□ -1.45
COL4A1P02462 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6□□□□□ -1.45
COL4A1P02462 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6□□□□□ -1.45
COL4A1P02462 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6□□□□□ -1.45
COL4A1P02462 AL034374.2-201ENST00000605281 548 ntBASIC6□□□□□ -1.45
COL4A1P02462 AL352984.2-202ENST00000613699 155 ntBASIC6□□□□□ -1.45
COL4A1P02462 AL138960.1-201ENST00000613838 513 ntBASIC6□□□□□ -1.45
COL4A1P02462 AC005261.2-201ENST00000593427 4258 ntBASIC6□□□□□ -1.45
COL4A1P02462 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A1P02462 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6□□□□□ -1.45
COL4A1P02462 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC6□□□□□ -1.45
COL4A1P02462 KARSP3-201ENST00000571212 1504 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A1P02462 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.99□□□□□ -1.45
COL4A1P02462 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A1P02462 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A1P02462 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A1P02462 MIR659-201ENST00000384963 97 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 RNU1-82P-201ENST00000390851 165 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 GLUD1P9-201ENST00000420997 1173 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 RSL24D1P6-201ENST00000426934 401 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A1P02462 RN7SL481P-201ENST00000477764 299 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 AC104971.1-201ENST00000495117 578 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A1P02462 AC018558.5-201ENST00000565840 952 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 MIR4277-201ENST00000578298 84 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 MIR4715-201ENST00000584117 79 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A1P02462 AC009704.2-201ENST00000618739 483 ntBASIC5.99□□□□□ -1.45
COL4A1P02462 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A1P02462 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL4A1P02462 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A1P02462 SNORA73.1-201ENST00000363107 205 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL4A1P02462 ATG4AP1-201ENST00000416893 538 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 AC068287.1-201ENST00000430283 295 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A1P02462 AC079168.2-201ENST00000453977 416 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 NIP7P2-201ENST00000485801 544 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 NIFKP7-201ENST00000503365 834 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A1P02462 AC091868.1-201ENST00000508746 304 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A1P02462 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC040958.1-201ENST00000561102 201 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms