Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC068870.1-201ENST00000563737 2455 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.45□□□□□ -1.54
PDGFBP01127 SNORA70H-201ENST00000383910 135 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 SNORA70J-201ENST00000384182 135 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 RNU6-1263P-201ENST00000384601 106 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 RNU2-50P-201ENST00000410494 143 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 AC069213.2-201ENST00000420238 366 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDGFBP01127 AC009480.2-201ENST00000422916 432 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFBP01127 AL672138.1-201ENST00000450604 1015 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 AC104634.1-201ENST00000452720 462 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFBP01127 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFBP01127 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFBP01127 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFBP01127 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFBP01127 IGKV2D-10-201ENST00000520194 281 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 AP000859.1-201ENST00000525536 307 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFBP01127 AC091193.1-201ENST00000604640 448 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 AC009597.2-201ENST00000604659 592 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 MIR6780A-201ENST00000615089 68 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.45□□□□□ -1.54
PDGFBP01127 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFBP01127 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFBP01127 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PDGFBP01127 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PDGFBP01127 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDGFBP01127 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFBP01127 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDGFBP01127 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PDGFBP01127 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 Z98755.1-201ENST00000407015 1384 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFBP01127 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PDGFBP01127 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PDGFBP01127 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFBP01127 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFBP01127 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 MIR600-201ENST00000385007 98 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 MIR105-1-201ENST00000385222 81 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 CASKP1-201ENST00000412870 582 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFBP01127 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 H3F3BP1-201ENST00000440551 403 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFBP01127 AL596266.1-201ENST00000448132 400 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 CYCSP42-201ENST00000450823 238 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFBP01127 OR7L1P-201ENST00000456181 380 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFBP01127 AC063943.1-201ENST00000465434 453 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AC097484.1-201ENST00000471148 389 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 OR11I1P-201ENST00000486033 954 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFBP01127 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFBP01127 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFBP01127 AP000619.2-201ENST00000546014 969 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PDGFBP01127 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFBP01127 DHFRP1-201ENST00000579682 559 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AC011497.2-201ENST00000600255 639 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AC020910.2-201ENST00000603635 610 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 OR7M1P-201ENST00000608946 533 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AL627230.1-201ENST00000613077 211 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 AL591926.8-201ENST00000616876 211 ntBASIC5.44□□□□□ -1.54
PDGFBP01127 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
PDGFBP01127 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PDGFBP01127 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFBP01127 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFBP01127 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PDGFBP01127 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PDGFBP01127 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFBP01127 SNORA70.9-201ENST00000384370 135 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFBP01127 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFBP01127 RSL24D1P6-201ENST00000426934 401 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 AC016027.5-201ENST00000427227 210 ntBASIC5.43□□□□□ -1.54
PDGFBP01127 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFBP01127 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms