Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX4O60224 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX4O60224 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX4O60224 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX4O60224 ZNF92P2-201ENST00000600543 1059 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AC005776.1-201ENST00000603164 290 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AL136131.3-201ENST00000607600 188 ntBASIC5.09□□□□□ -1.59
SSX4O60224 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX4O60224 AC016542.1-201ENST00000608259 493 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AL645927.2-201ENST00000618350 349 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AL357562.1-201ENST00000624911 609 ntBASIC5.09□□□□□ -1.59
SSX4O60224 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX4O60224 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.09□□□□□ -1.6
SSX4O60224 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.09□□□□□ -1.6
SSX4O60224 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SSX4O60224 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.09□□□□□ -1.6
SSX4O60224 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SSX4O60224 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
SSX4O60224 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 AC093591.2-201ENST00000565254 3843 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 AC006206.1-201ENST00000544842 3387 ntBASIC5.08□□□□□ -1.6
SSX4O60224 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 OR10R3P-201ENST00000361688 942 ntBASIC5.08□□□□□ -1.6
SSX4O60224 RNU105B-201ENST00000364478 208 ntBASIC5.08□□□□□ -1.6
SSX4O60224 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSX4O60224 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX4O60224 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 MT-TP-201ENST00000387461 68 ntBASIC5.08□□□□□ -1.6
SSX4O60224 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSX4O60224 RNU6-1320P-201ENST00000390838 107 ntBASIC5.08□□□□□ -1.6
SSX4O60224 RNU6-1269P-201ENST00000391139 107 ntBASIC5.08□□□□□ -1.6
SSX4O60224 U3.25-201ENST00000391209 220 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 RPS26P13-201ENST00000419030 330 ntBASIC5.08□□□□□ -1.6
SSX4O60224 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 RPS15AP30-201ENST00000420976 390 ntBASIC5.08□□□□□ -1.6
SSX4O60224 ARL2BPP3-201ENST00000421226 480 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 AL121776.1-201ENST00000429337 372 ntBASIC5.08□□□□□ -1.6
SSX4O60224 GAPDHP48-201ENST00000436626 961 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC015983.1-201ENST00000441577 373 ntBASIC5.08□□□□□ -1.6
SSX4O60224 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX4O60224 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 RNU6-599P-201ENST00000459383 107 ntBASIC5.08□□□□□ -1.6
SSX4O60224 RNU6-1193P-201ENST00000459461 107 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 RN7SL629P-201ENST00000489622 285 ntBASIC5.08□□□□□ -1.6
SSX4O60224 RN7SL57P-201ENST00000493687 290 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC023424.1-201ENST00000496058 459 ntBASIC5.08□□□□□ -1.6
SSX4O60224 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 AC112206.4-201ENST00000515142 405 ntBASIC5.08□□□□□ -1.6
SSX4O60224 MTCYBP19-201ENST00000517463 1124 ntBASIC5.08□□□□□ -1.6
SSX4O60224 CYCSP22-201ENST00000517555 339 ntBASIC5.08□□□□□ -1.6
SSX4O60224 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 AC109635.6-201ENST00000525487 1113 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AP000648.1-201ENST00000529682 397 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC068993.1-201ENST00000546724 589 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC093014.1-201ENST00000548926 724 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX4O60224 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 AC007225.2-201ENST00000562529 256 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX4O60224 AC068020.1-201ENST00000594215 661 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC130352.1-201ENST00000602979 661 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC006363.1-201ENST00000603806 463 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AL031601.1-201ENST00000605702 394 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AL512624.1-201ENST00000613638 469 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC022467.1-201ENST00000614738 749 ntBASIC5.08□□□□□ -1.6
SSX4O60224 RNU6-368P-201ENST00000620928 107 ntBASIC5.08□□□□□ -1.6
SSX4O60224 RNU6-538P-201ENST00000622329 107 ntBASIC5.08□□□□□ -1.6
SSX4O60224 RPL23AP61-201ENST00000623642 466 ntBASIC5.08□□□□□ -1.6
SSX4O60224 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX4O60224 MIR193BHG-214ENST00000641765 509 ntBASIC5.08□□□□□ -1.6
SSX4O60224 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX4O60224 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 AL034549.2-201ENST00000618285 3373 ntBASIC5.08□□□□□ -1.6
SSX4O60224 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX4O60224 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX4O60224 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SSX4O60224 CASC19-281ENST00000642118 1554 ntBASIC5.08□□□□□ -1.6
SSX4O60224 AC144833.1-201ENST00000567953 4089 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms