Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 AC112255.1-201ENST00000624070 2493 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AL138820.1-201ENST00000617901 5305 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AL035696.2-201ENST00000407941 709 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 CASKP1-201ENST00000412870 582 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AC245060.4-201ENST00000413293 1121 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 ATG4AP1-201ENST00000416893 538 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AK4P4-201ENST00000419465 646 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AC126120.1-201ENST00000431082 470 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AL445665.1-202ENST00000452436 324 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AC007998.1-201ENST00000474156 672 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC008410.1-201ENST00000483777 339 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 RPL32P33-201ENST00000487023 394 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 SNORD46.2-201ENST00000516021 102 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 SCARNA20.4-201ENST00000516969 131 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 TRAV11-201ENST00000539512 339 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM1O00151 HSPE1P2-201ENST00000554777 306 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.13□□□□□ -1.59
PDLIM1O00151 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC090607.5-201ENST00000615692 224 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AP005431.1-201ENST00000618479 319 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 uc_338.7-201ENST00000621834 124 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AC002044.3-201ENST00000623314 541 ntBASIC5.13□□□□□ -1.59
PDLIM1O00151 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.13□□□□□ -1.59
PDLIM1O00151 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDLIM1O00151 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM1O00151 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM1O00151 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PDLIM1O00151 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PDLIM1O00151 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM1O00151 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 OR10J6P-201ENST00000289731 930 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 AL159987.1-201ENST00000347911 293 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 MIR375-201ENST00000362103 64 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 RNA5SP284-201ENST00000384547 118 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
PDLIM1O00151 SNORA11.3-201ENST00000408471 128 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 SNORA79B-201ENST00000410557 148 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM1O00151 CDY17P-201ENST00000414121 1282 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM1O00151 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 AC016772.1-201ENST00000444170 1261 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM1O00151 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM1O00151 OR52Y1P-201ENST00000452418 828 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 RN7SL570P-201ENST00000484405 292 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 NENFP3-201ENST00000503735 313 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM1O00151 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.12□□□□□ -1.59
PDLIM1O00151 HMGB3P13-201ENST00000511263 607 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 SNORA70.20-201ENST00000516848 126 ntBASIC5.12□□□□□ -1.59
PDLIM1O00151 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM1O00151 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms