Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 SNORA51.9-201ENST00000384295 124 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 HMGN1P20-201ENST00000411849 300 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AL935212.3-201ENST00000450729 284 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 SLC25A51P1-201ENST00000468432 871 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC091959.2-201ENST00000477363 321 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 RN7SL326P-201ENST00000477493 296 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC087672.1-201ENST00000479876 766 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC011037.1-201ENST00000483964 558 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 PPP1R11P1-201ENST00000486095 376 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC034244.1-201ENST00000507687 207 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC113347.3-201ENST00000509113 148 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 SNORA3.4-201ENST00000515969 96 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 RN7SKP35-201ENST00000517210 151 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 IGKV3D-25-201ENST00000519599 235 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AP002373.2-201ENST00000541631 1060 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 MRPS21P8-201ENST00000569196 235 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC009237.15-201ENST00000610252 501 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 MIR6862-1-201ENST00000613016 70 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AL138960.1-201ENST00000613838 513 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 MIR6862-2-201ENST00000614755 70 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC091304.6-201ENST00000619761 202 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AP003485.2-201ENST00000623636 610 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 AC007342.5-201ENST00000571340 2142 ntBASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA6Q9Y5G7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AL161912.4-201ENST00000623889 2468 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC011455.2-201ENST00000599320 3336 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC023490.2-201ENST00000359859 470 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 RNU1-59P-201ENST00000364829 162 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 Y_RNA.472-201ENST00000384322 102 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 LRRC37BP1-201ENST00000398851 714 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AL590290.1-201ENST00000405336 380 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 HMGA1P8-201ENST00000414130 321 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 NME1P1-201ENST00000420914 382 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 HIGD1AP12-201ENST00000427832 281 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AP001324.1-201ENST00000428553 399 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 RPS24P8-201ENST00000431490 402 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 RPL7P34-201ENST00000433316 712 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 NPM1P13-201ENST00000452663 865 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC022206.1-201ENST00000495947 347 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 IGKV3D-34-201ENST00000522638 302 ntBASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA6Q9Y5G7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms