Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RN7SL570P-201ENST00000484405 292 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 C1DP5-201ENST00000525775 383 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC084759.1-201ENST00000561168 290 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 DPPA2P4-201ENST00000563717 878 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC015720.2-201ENST00000567709 334 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AP001357.1-201ENST00000586304 1053 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC211433.2-201ENST00000608433 387 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AL645927.2-201ENST00000618350 349 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AL445528.2-201ENST00000620582 470 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC095038.2-201ENST00000621464 1070 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC099654.8-201ENST00000637757 681 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC016745.2-201ENST00000608834 3443 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC106754.1-201ENST00000562632 1513 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 BCORP1-203ENST00000513194 5093 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 KYNUP3-201ENST00000574386 1341 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AL929601.4-201ENST00000613011 1341 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AC087516.1-201ENST00000561236 2428 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 CASC19-260ENST00000641828 2001 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 RNU6-792P-201ENST00000363490 107 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 ST13P16-201ENST00000401760 781 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 RN7SKP278-201ENST00000410504 342 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 RMRPP5-201ENST00000411156 267 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 OR51A6P-201ENST00000418680 1004 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AL354766.1-201ENST00000423396 542 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 MORF4L1P7-201ENST00000426038 703 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 RN7SL72P-201ENST00000460697 269 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AL603882.1-201ENST00000463059 681 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 NAMPTP2-201ENST00000505629 1115 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 OR7E13P-201ENST00000526052 910 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 RBM22P12-201ENST00000567098 1255 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 AC004890.3-201ENST00000605566 1095 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 Z95327.3-201ENST00000610385 572 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 OR11H2-202ENST00000641517 1085 ntBASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX2IPQ9Y2D8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 AC093849.1-201ENST00000563631 2209 ntBASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 AC016027.5-201ENST00000427227 210 ntBASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 RPS26P4-201ENST00000431743 355 ntBASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 FMO7P-201ENST00000436045 768 ntBASIC6.16□□□□□ -1.42
SSX2IPQ9Y2D8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms