Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 SMG1P5-202ENST00000529428 4219 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 SMG1P2-201ENST00000566127 4221 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC091544.5-201ENST00000620192 3815 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 HSPA8P11-201ENST00000508840 1898 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AP002001.2-201ENST00000529025 1469 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC008033.1-201ENST00000216407 1162 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 COX6B1P3-201ENST00000312310 260 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 RPS26P38-201ENST00000414476 348 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 MGAT2P1-201ENST00000449718 797 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 BZW1P1-201ENST00000454901 1240 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 PTMAP1-205ENST00000455552 325 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 MTND1P11-201ENST00000456661 876 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 RPS4XP15-201ENST00000489210 795 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 CYCSP25-201ENST00000525280 316 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC005832.3-201ENST00000537929 631 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC124947.2-202ENST00000552735 133 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 RBM22P12-201ENST00000567098 1255 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 SEPT7P9-203ENST00000604116 343 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC104458.1-201ENST00000608243 463 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC024884.1-201ENST00000620583 399 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 MIR3688-2-201ENST00000636963 87 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC137056.2-201ENST00000624055 1958 ntBASIC8.27□□□□□ -1.08
ZC3H4Q9UPT8 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
ZC3H4Q9UPT8 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
ZC3H4Q9UPT8 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AL080317.3-201ENST00000607434 4315 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AL391261.1-201ENST00000555712 1479 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 KARSP2-201ENST00000415696 1639 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 PABPC1P9-201ENST00000426076 1612 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AKAP17BP-201ENST00000431706 2719 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 METTL21EP-201ENST00000298105 713 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 RPS27AP11-201ENST00000402798 447 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 RPS3P2-201ENST00000421346 701 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 PNKDP1-201ENST00000435914 430 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 ARL5AP2-201ENST00000444698 533 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC002486.2-201ENST00000447806 590 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AL591363.1-201ENST00000450091 483 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 RN7SL160P-201ENST00000468558 284 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC006539.1-201ENST00000481419 501 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms