Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC087897.1-201ENST00000550134 156 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC063962.1-201ENST00000608199 521 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC021106.3-201ENST00000623925 531 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC005858.3-201ENST00000624756 589 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 U2.22-201ENST00000636441 106 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC119674.1-207ENST00000641355 633 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 MTND5P16-201ENST00000460269 1703 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 ANKRD62P1-201ENST00000434304 1623 ntBASIC8.76□□□□□ -1.01
PDZRN3Q9UPQ7 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 Y_RNA.9-201ENST00000362354 101 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 OR4K6P-201ENST00000416478 897 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AL512649.1-201ENST00000428997 581 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC018804.1-201ENST00000430381 618 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 GAPDHP37-201ENST00000442317 968 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC008280.2-201ENST00000455473 307 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 IGKV2D-38-201ENST00000518423 240 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 IGLVV-66-201ENST00000523818 341 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC009729.1-201ENST00000548873 1133 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC026826.3-201ENST00000561747 158 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC007346.1-201ENST00000569208 867 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 MIMT1-201ENST00000597105 1050 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC096553.1-201ENST00000605169 829 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC008536.2-201ENST00000607284 349 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AL139418.1-201ENST00000613613 177 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 uc_338.29-201ENST00000615099 168 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AP002001.2-201ENST00000529025 1469 ntBASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PDZRN3Q9UPQ7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC087392.3-202ENST00000358446 1754 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL137100.1-201ENST00000556703 1620 ntBASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms