Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RSPO3Q9BXY4 AL022393.1-201ENST00000625142 1677 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 RNA5SP223-201ENST00000365174 120 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC009804.1-201ENST00000400949 179 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 RN7SKP278-201ENST00000410504 342 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 TRGV5P-201ENST00000419915 354 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AL133325.1-201ENST00000421090 382 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 NANOGP4-201ENST00000427230 913 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 RPS17P2-201ENST00000461663 408 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC231760.1-201ENST00000498002 260 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 RPS4XP20-201ENST00000505751 772 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 RNA5SP362-201ENST00000516048 118 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AC018695.5-201ENST00000605872 315 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 AL022311.1-201ENST00000623726 19416 ntBASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RSPO3Q9BXY4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 OR8V1P-201ENST00000395193 873 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 CTSL3P-202ENST00000412179 788 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 OR5M12P-201ENST00000423388 929 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 RPL7L1P9-201ENST00000431298 745 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AL450023.3-201ENST00000440592 271 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AL356981.1-201ENST00000454879 684 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 SEPT7P3-201ENST00000455017 621 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 RPS4XP1-201ENST00000482189 787 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 RPS23P1-201ENST00000491662 432 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 OR11J2P-201ENST00000555298 907 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 MIR4489-201ENST00000578869 62 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC107993.1-201ENST00000591343 684 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC006363.1-201ENST00000603806 463 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 OR51C1P-201ENST00000608504 942 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 SAMMSON-227ENST00000642114 1199 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC011447.7-201ENST00000624228 1590 ntBASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC063976.2-201ENST00000425667 3556 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms