Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 Y_RNA.192-201ENST00000363977 102 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 Y_RNA.279-201ENST00000364763 95 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 Y_RNA.401-201ENST00000383965 117 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 Y_RNA.402-201ENST00000383972 102 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 RNU6-331P-201ENST00000384724 107 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 FDPSP5-201ENST00000399474 1057 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 RNA5SP115-201ENST00000411160 107 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 GEMIN2P2-201ENST00000418195 715 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AL009174.1-201ENST00000426577 416 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC244505.3-201ENST00000454598 187 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 DHFRP3-201ENST00000455595 559 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 RPL7AP52-201ENST00000458096 790 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 RN7SL390P-201ENST00000470634 284 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 ST13P6-201ENST00000522430 1102 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 IGLVI-42-201ENST00000522485 381 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 OR5AQ1P-201ENST00000527596 927 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 PPIAP6-201ENST00000557078 499 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC068802.1-201ENST00000603420 732 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AL359535.1-201ENST00000612100 1087 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 AC111152.1-202ENST00000635848 339 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 MTND4LP32-201ENST00000636111 270 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 TEX21P-201ENST00000447107 1476 ntBASIC8.1□□□□□ -1.11
TRIM47Q96LD4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TRIM47Q96LD4 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AL137918.1-201ENST00000624542 1922 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 OR52K3P-202ENST00000641797 1729 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 Y_RNA.62-201ENST00000362840 99 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 Y_RNA.573-201ENST00000384763 105 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 TPT1P2-201ENST00000413105 503 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AL513185.2-201ENST00000425543 193 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC018804.1-201ENST00000430381 618 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 BX679664.2-201ENST00000439282 283 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms