Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RBBP4P1-201ENST00000502424 1276 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC093770.1-201ENST00000511559 571 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 RNU6-889P-201ENST00000517189 103 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC092709.1-201ENST00000521355 1045 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC087272.1-201ENST00000523624 533 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC084121.1-201ENST00000533882 835 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC079905.1-201ENST00000549280 475 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC087888.1-201ENST00000550884 1254 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC040958.1-201ENST00000561102 201 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AGGF1P7-201ENST00000562369 913 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC034236.3-201ENST00000605999 461 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC025574.1-201ENST00000554784 1653 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 SNORA48.4-201ENST00000391089 134 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 BX284632.2-201ENST00000421091 399 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC006065.1-201ENST00000422539 802 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 RPL23AP4-201ENST00000427757 463 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 BX323845.3-201ENST00000428215 527 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 ZFAND6P1-201ENST00000434138 605 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AL512605.1-202ENST00000441919 381 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC245517.2-201ENST00000442890 346 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AL359955.2-201ENST00000445380 353 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 IGBP1P3-201ENST00000447449 1000 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 CFL1P4-201ENST00000451536 498 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC007688.1-201ENST00000475592 759 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC021146.7-201ENST00000509604 775 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 BTG4P1-201ENST00000510421 183 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 SCARNA18.1-201ENST00000516330 83 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 IGHV3-63-201ENST00000518422 341 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC007956.1-201ENST00000555623 542 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AL845552.1-201ENST00000556820 323 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 CYCSP38-201ENST00000559840 322 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 MIR6793-201ENST00000612376 63 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AL356274.1-201ENST00000617064 410 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AL683826.1-201ENST00000624104 627 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 CASC19-274ENST00000642018 970 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 PWAR1-201ENST00000624188 2414 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 VPS35P1-201ENST00000563400 1518 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 UGT2B26P-201ENST00000508672 1613 ntBASIC4.86□□□□□ -1.63
RFT1Q96AA3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms