Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 RNA5SP319-201ENST00000362768 119 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC211486.3-201ENST00000412694 621 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 P2RY10P2-201ENST00000416730 913 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC093162.1-201ENST00000419682 124 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC104837.2-201ENST00000427236 424 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC073648.4-201ENST00000442655 781 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 PPP1R11P1-201ENST00000486095 376 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC019322.1-201ENST00000571869 389 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC091932.2-201ENST00000623014 291 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 CR381572.2-201ENST00000624852 397 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC006210.2-201ENST00000367074 1545 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC004817.4-201ENST00000602396 3625 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 RNA5SP305-201ENST00000362665 119 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 RNVU1-6-201ENST00000364688 164 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 RN7SKP27-201ENST00000410684 333 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC017019.1-201ENST00000426129 261 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC009220.1-201ENST00000451614 275 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 RPS23P7-201ENST00000466210 444 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 BNIP3P35-201ENST00000604530 490 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 BX005214.3-202ENST00000619809 325 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC019206.1-201ENST00000621938 425 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 AC074101.1-201ENST00000637861 241 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 SAMMSON-210ENST00000641260 1308 ntBASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM3Q8TF72 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 U3.36-201ENST00000408418 213 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC009506.2-201ENST00000420635 840 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RPS29P10-201ENST00000439197 166 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 TCEA1P3-201ENST00000443005 880 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RPL7P45-201ENST00000455851 743 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC109462.1-201ENST00000491087 368 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 GLUD1P3-202ENST00000508551 200 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 HPRT1P1-201ENST00000509498 657 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC006116.3-201ENST00000592968 361 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 AC092376.2-201ENST00000622621 4116 ntBASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM3Q8TF72 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms