Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 GNG5P1-201ENST00000255500 204 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 RNA5SP263-201ENST00000363376 128 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 Y_RNA.142-201ENST00000363491 102 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 FDPSP5-201ENST00000399474 1057 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL121972.1-201ENST00000402023 252 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC007390.1-201ENST00000415722 356 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 RPL34P19-201ENST00000415903 342 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC133104.1-201ENST00000429100 218 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 CBX1P1-201ENST00000440184 427 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 ACTP1-201ENST00000440793 383 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 RPL4P2-201ENST00000447259 1282 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 ARPC3P5-201ENST00000448802 534 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MTCO1P42-201ENST00000457379 726 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC022364.2-201ENST00000457963 554 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL122013.1-201ENST00000473054 801 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MTND1P3-201ENST00000484956 952 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MTND5P5-201ENST00000503764 376 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC109481.1-201ENST00000509173 282 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 PMS2P3-207ENST00000529061 717 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 OR4A12P-201ENST00000530847 918 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL389895.1-201ENST00000554127 252 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 HSPE1P2-201ENST00000554777 306 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL157394.1-201ENST00000562983 1224 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC034268.2-201ENST00000571784 482 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 RN7SL785P-201ENST00000578437 253 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 HMGN1P30-201ENST00000589286 268 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC005498.1-201ENST00000592125 465 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL391646.1-201ENST00000603860 190 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC087283.1-201ENST00000604029 1074 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC012511.1-201ENST00000608140 449 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MIR6726-201ENST00000613751 61 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 uc_338.9-201ENST00000617424 182 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MED15P6-202ENST00000621415 787 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL109806.1-201ENST00000623967 1248 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AC073488.11-201ENST00000633298 754 ntBASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.12□□□□□ -1.27
DEPDC4Q8N2C3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 AC122713.2-201ENST00000624942 3335 ntBASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
DEPDC4Q8N2C3 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms