Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 MIR589-201ENST00000385238 99 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 RAB5CP1-201ENST00000395972 580 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 RN7SKP125-201ENST00000410481 302 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 GABARAPL3-201ENST00000412799 354 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AL390119.1-201ENST00000440329 312 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC135999.1-201ENST00000478962 479 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 RN7SL814P-201ENST00000487715 300 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC015720.2-201ENST00000567709 334 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC022884.2-201ENST00000578535 580 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 RBM22P1-201ENST00000578589 1214 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC011626.1-201ENST00000604710 562 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 AC000068.2-201ENST00000608816 460 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 MIR1910-201ENST00000636955 80 ntBASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC50Q8IVM0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC063976.2-201ENST00000425667 3556 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 TMSB4XP4-201ENST00000323496 618 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 MIR133B-201ENST00000362210 119 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 OR4K12P-201ENST00000406538 961 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 GAPDHP58-201ENST00000438477 1006 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 NOP56P2-201ENST00000447491 769 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC079168.1-201ENST00000458741 345 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC108161.1-201ENST00000461060 402 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 RN7SL189P-201ENST00000468631 289 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC022795.1-201ENST00000473808 480 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 NIFKP7-201ENST00000503365 834 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AL671862.1-201ENST00000515851 349 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC027544.3-201ENST00000535082 757 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 YWHABP2-201ENST00000540201 713 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC135626.1-201ENST00000556983 435 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 NDUFA5P11-201ENST00000567995 343 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 RN7SL708P-201ENST00000580952 299 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 MIR1273E-201ENST00000581165 102 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC009597.2-201ENST00000604659 592 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 SAMMSON-213ENST00000641336 1521 ntBASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC50Q8IVM0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 TET1P1-201ENST00000426627 2301 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 SDHDP6-201ENST00000414693 480 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 RANP7-201ENST00000418085 644 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 VN1R3-201ENST00000418822 919 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms