Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RPL34P6-201ENST00000432390 345 ntBASIC4.66□□□□□ -1.66
SRP9P49458 RPS11P7-201ENST00000442125 465 ntBASIC4.66□□□□□ -1.66
SRP9P49458 GTF3AP5-201ENST00000442645 697 ntBASIC4.66□□□□□ -1.66
SRP9P49458 AC019185.1-201ENST00000442718 389 ntBASIC4.66□□□□□ -1.66
SRP9P49458 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SRP9P49458 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SRP9P49458 EIF1P7-201ENST00000487533 337 ntBASIC4.66□□□□□ -1.66
SRP9P49458 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRP9P49458 RPL15P21-201ENST00000495592 567 ntBASIC4.66□□□□□ -1.66
SRP9P49458 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.66□□□□□ -1.66
SRP9P49458 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.66□□□□□ -1.66
SRP9P49458 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.66□□□□□ -1.66
SRP9P49458 AC078878.1-201ENST00000539832 958 ntBASIC4.66□□□□□ -1.66
SRP9P49458 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.66□□□□□ -1.66
SRP9P49458 AC020978.7-201ENST00000575953 1187 ntBASIC4.66□□□□□ -1.66
SRP9P49458 AC022884.2-201ENST00000578535 580 ntBASIC4.66□□□□□ -1.66
SRP9P49458 AC060766.1-201ENST00000590824 627 ntBASIC4.66□□□□□ -1.66
SRP9P49458 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRP9P49458 AP000769.2-201ENST00000602344 396 ntBASIC4.66□□□□□ -1.66
SRP9P49458 AC010245.2-201ENST00000606908 1167 ntBASIC4.66□□□□□ -1.66
SRP9P49458 AC037198.3-201ENST00000616754 526 ntBASIC4.66□□□□□ -1.66
SRP9P49458 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.66□□□□□ -1.66
SRP9P49458 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.66□□□□□ -1.66
SRP9P49458 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.66□□□□□ -1.66
SRP9P49458 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRP9P49458 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.66□□□□□ -1.66
SRP9P49458 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.66□□□□□ -1.66
SRP9P49458 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRP9P49458 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRP9P49458 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
SRP9P49458 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SRP9P49458 OR4G1P-202ENST00000641173 1788 ntBASIC4.65□□□□□ -1.66
SRP9P49458 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SRP9P49458 AC000123.3-201ENST00000624029 4975 ntBASIC4.65□□□□□ -1.66
SRP9P49458 STX3-208ENST00000641815 3236 ntBASIC4.65□□□□□ -1.66
SRP9P49458 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
SRP9P49458 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.65□□□□□ -1.66
SRP9P49458 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SRP9P49458 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.65□□□□□ -1.66
SRP9P49458 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SRP9P49458 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SRP9P49458 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.65□□□□□ -1.67
SRP9P49458 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SRP9P49458 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 OR3A2-201ENST00000408891 1076 ntBASIC4.65□□□□□ -1.67
SRP9P49458 RN7SKP206-201ENST00000410823 293 ntBASIC4.65□□□□□ -1.67
SRP9P49458 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.65□□□□□ -1.67
SRP9P49458 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.65□□□□□ -1.67
SRP9P49458 AC090018.1-201ENST00000434369 367 ntBASIC4.65□□□□□ -1.67
SRP9P49458 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.65□□□□□ -1.67
SRP9P49458 AL390119.1-201ENST00000440329 312 ntBASIC4.65□□□□□ -1.67
SRP9P49458 ARAFP2-201ENST00000440565 559 ntBASIC4.65□□□□□ -1.67
SRP9P49458 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.65□□□□□ -1.67
SRP9P49458 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.65□□□□□ -1.67
SRP9P49458 AC105399.1-202ENST00000447303 205 ntBASIC4.65□□□□□ -1.67
SRP9P49458 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.65□□□□□ -1.67
SRP9P49458 AL672138.1-201ENST00000450604 1015 ntBASIC4.65□□□□□ -1.67
SRP9P49458 RNA5SP103-201ENST00000459503 118 ntBASIC4.65□□□□□ -1.67
SRP9P49458 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.65□□□□□ -1.67
SRP9P49458 AC093827.1-201ENST00000480094 861 ntBASIC4.65□□□□□ -1.67
SRP9P49458 RN7SL447P-201ENST00000494711 245 ntBASIC4.65□□□□□ -1.67
SRP9P49458 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.65□□□□□ -1.67
SRP9P49458 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.65□□□□□ -1.67
SRP9P49458 BX510359.5-201ENST00000515651 304 ntBASIC4.65□□□□□ -1.67
SRP9P49458 RNU6-964P-201ENST00000516524 69 ntBASIC4.65□□□□□ -1.67
SRP9P49458 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 AC084759.1-201ENST00000561168 290 ntBASIC4.65□□□□□ -1.67
SRP9P49458 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.65□□□□□ -1.67
SRP9P49458 AP005403.1-201ENST00000579720 229 ntBASIC4.65□□□□□ -1.67
SRP9P49458 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.65□□□□□ -1.67
SRP9P49458 AC244107.2-201ENST00000611773 76 ntBASIC4.65□□□□□ -1.67
SRP9P49458 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.65□□□□□ -1.67
SRP9P49458 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 AP001005.3-201ENST00000622049 129 ntBASIC4.65□□□□□ -1.67
SRP9P49458 AC074101.1-201ENST00000637861 241 ntBASIC4.65□□□□□ -1.67
SRP9P49458 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.65□□□□□ -1.67
SRP9P49458 AC120338.1-201ENST00000625074 1541 ntBASIC4.65□□□□□ -1.67
SRP9P49458 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 ZNF652P1-201ENST00000442420 1309 ntBASIC4.65□□□□□ -1.67
SRP9P49458 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 AC011447.7-201ENST00000624228 1590 ntBASIC4.65□□□□□ -1.67
SRP9P49458 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRP9P49458 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.65□□□□□ -1.67
SRP9P49458 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SRP9P49458 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SRP9P49458 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SRP9P49458 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SRP9P49458 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SRP9P49458 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms