Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC009238.2-201ENST00000431026 355 ntBASIC5.19□□□□□ -1.58
RPA3P35244 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.19□□□□□ -1.58
RPA3P35244 OR2AO1P-201ENST00000476497 403 ntBASIC5.19□□□□□ -1.58
RPA3P35244 RPL7P40-201ENST00000481703 745 ntBASIC5.19□□□□□ -1.58
RPA3P35244 RPEP1-201ENST00000504507 658 ntBASIC5.19□□□□□ -1.58
RPA3P35244 ATP5LP3-201ENST00000514223 304 ntBASIC5.19□□□□□ -1.58
RPA3P35244 AC006427.1-201ENST00000514359 712 ntBASIC5.19□□□□□ -1.58
RPA3P35244 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.19□□□□□ -1.58
RPA3P35244 YWHABP2-201ENST00000540201 713 ntBASIC5.19□□□□□ -1.58
RPA3P35244 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RPA3P35244 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.19□□□□□ -1.58
RPA3P35244 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 AL359513.1-201ENST00000614364 557 ntBASIC5.19□□□□□ -1.58
RPA3P35244 BNIP3P41-202ENST00000616656 861 ntBASIC5.19□□□□□ -1.58
RPA3P35244 MIR6729-201ENST00000618194 65 ntBASIC5.19□□□□□ -1.58
RPA3P35244 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.19□□□□□ -1.58
RPA3P35244 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPA3P35244 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPA3P35244 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RPA3P35244 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPA3P35244 AL132656.3-201ENST00000606384 1595 ntBASIC5.19□□□□□ -1.58
RPA3P35244 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.19□□□□□ -1.58
RPA3P35244 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
RPA3P35244 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RPA3P35244 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RPA3P35244 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
RPA3P35244 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RPA3P35244 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.18□□□□□ -1.58
RPA3P35244 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RPA3P35244 MIR105-1-201ENST00000385222 81 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AC005522.1-201ENST00000395416 346 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.18□□□□□ -1.58
RPA3P35244 AC017078.1-201ENST00000416146 368 ntBASIC5.18□□□□□ -1.58
RPA3P35244 SETP9-201ENST00000423837 832 ntBASIC5.18□□□□□ -1.58
RPA3P35244 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.18□□□□□ -1.58
RPA3P35244 CFL1P1-202ENST00000432948 411 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AC104634.1-201ENST00000452720 462 ntBASIC5.18□□□□□ -1.58
RPA3P35244 RNA5SP103-201ENST00000459503 118 ntBASIC5.18□□□□□ -1.58
RPA3P35244 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.18□□□□□ -1.58
RPA3P35244 AC005412.2-201ENST00000492004 341 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.18□□□□□ -1.58
RPA3P35244 RNA5SP303-201ENST00000516192 130 ntBASIC5.18□□□□□ -1.58
RPA3P35244 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.18□□□□□ -1.58
RPA3P35244 IGKV2-18-201ENST00000522607 343 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.18□□□□□ -1.58
RPA3P35244 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.18□□□□□ -1.58
RPA3P35244 AC007225.2-201ENST00000562529 256 ntBASIC5.18□□□□□ -1.58
RPA3P35244 FKBP1AP1-201ENST00000594588 318 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.18□□□□□ -1.58
RPA3P35244 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.18□□□□□ -1.58
RPA3P35244 AP000864.1-201ENST00000609424 650 ntBASIC5.18□□□□□ -1.58
RPA3P35244 MIR6862-1-201ENST00000613016 70 ntBASIC5.18□□□□□ -1.58
RPA3P35244 MIR6862-2-201ENST00000614755 70 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AC241377.1-201ENST00000619797 406 ntBASIC5.18□□□□□ -1.58
RPA3P35244 AC015871.5-202ENST00000623252 701 ntBASIC5.18□□□□□ -1.58
RPA3P35244 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RPA3P35244 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RPA3P35244 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.18□□□□□ -1.58
RPA3P35244 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RPA3P35244 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.18□□□□□ -1.58
RPA3P35244 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RPA3P35244 MTCO1P11-201ENST00000429111 1528 ntBASIC5.18□□□□□ -1.58
RPA3P35244 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPA3P35244 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.17□□□□□ -1.58
RPA3P35244 RN7SKP74-201ENST00000362849 309 ntBASIC5.17□□□□□ -1.58
RPA3P35244 RN7SKP162-201ENST00000363605 345 ntBASIC5.17□□□□□ -1.58
RPA3P35244 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RPA3P35244 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RPA3P35244 RNU1-74P-201ENST00000384108 171 ntBASIC5.17□□□□□ -1.58
RPA3P35244 RNU1-149P-201ENST00000390870 161 ntBASIC5.17□□□□□ -1.58
RPA3P35244 RNA5SP339-201ENST00000390987 122 ntBASIC5.17□□□□□ -1.58
RPA3P35244 AC013442.1-201ENST00000397347 228 ntBASIC5.17□□□□□ -1.58
RPA3P35244 RPL7L1P9-201ENST00000431298 745 ntBASIC5.17□□□□□ -1.58
RPA3P35244 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.17□□□□□ -1.58
RPA3P35244 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.17□□□□□ -1.58
RPA3P35244 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.17□□□□□ -1.58
RPA3P35244 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.17□□□□□ -1.58
RPA3P35244 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.17□□□□□ -1.58
RPA3P35244 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.17□□□□□ -1.58
RPA3P35244 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.17□□□□□ -1.58
RPA3P35244 AC126177.5-201ENST00000549599 178 ntBASIC5.17□□□□□ -1.58
RPA3P35244 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RPA3P35244 AL049779.2-201ENST00000553847 315 ntBASIC5.17□□□□□ -1.58
RPA3P35244 LSM1P2-201ENST00000604911 322 ntBASIC5.17□□□□□ -1.58
RPA3P35244 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms