Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.71□□□□□ -1.66
CD40LGP29965 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CD40LGP29965 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40LGP29965 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40LGP29965 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD40LGP29965 AL133268.1-201ENST00000405676 1401 ntBASIC4.71□□□□□ -1.66
CD40LGP29965 AL450326.2-201ENST00000421913 1962 ntBASIC4.71□□□□□ -1.66
CD40LGP29965 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.71□□□□□ -1.66
CD40LGP29965 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40LGP29965 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40LGP29965 MIPEPP2-201ENST00000422560 1819 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40LGP29965 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CD40LGP29965 RPS6P23-201ENST00000413224 722 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40LGP29965 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40LGP29965 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40LGP29965 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 AL138787.1-202ENST00000437804 898 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 AC068491.1-201ENST00000449539 1241 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 AC093166.4-201ENST00000457867 318 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 GYG1P1-201ENST00000460864 698 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 AC020890.1-201ENST00000491837 504 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40LGP29965 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 AC134698.5-201ENST00000519444 336 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40LGP29965 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40LGP29965 MIR4701-201ENST00000583094 63 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40LGP29965 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40LGP29965 AC087283.1-201ENST00000604029 1074 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 AL136131.3-201ENST00000607600 188 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 AP003400.3-201ENST00000624904 346 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CD40LGP29965 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
CD40LGP29965 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40LGP29965 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40LGP29965 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40LGP29965 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40LGP29965 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40LGP29965 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40LGP29965 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.69□□□□□ -1.66
CD40LGP29965 AC063976.2-201ENST00000425667 3556 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.69□□□□□ -1.66
CD40LGP29965 AP000542.2-201ENST00000623199 6179 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 IL6STP1-201ENST00000346911 1020 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD40LGP29965 SNORA51.9-201ENST00000384295 124 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AC004386.1-201ENST00000393214 761 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 RN7SKP108-201ENST00000411367 328 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40LGP29965 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40LGP29965 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40LGP29965 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40LGP29965 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40LGP29965 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40LGP29965 GAPDHP58-201ENST00000438477 1006 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.69□□□□□ -1.66
CD40LGP29965 AC104339.1-201ENST00000465478 348 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AL122020.1-201ENST00000472287 459 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AP002884.1-201ENST00000479691 655 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 RN7SL809P-201ENST00000482040 297 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AC008410.1-201ENST00000483777 339 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40LGP29965 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.69□□□□□ -1.66
CD40LGP29965 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40LGP29965 RNA5SP249-201ENST00000516127 99 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 RN7SKP238-201ENST00000516483 249 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 RPL23AP53-201ENST00000521854 457 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AL121839.1-201ENST00000556233 1185 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 SNORD39.2-201ENST00000579995 76 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 RN7SL176P-201ENST00000580352 264 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 MIR4260-201ENST00000583107 67 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40LGP29965 AC015849.6-201ENST00000605454 474 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40LGP29965 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 AP005431.1-201ENST00000618479 319 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40LGP29965 OR8A1-204ENST00000642111 1145 ntBASIC4.69□□□□□ -1.66
CD40LGP29965 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CD40LGP29965 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms