Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-249P-201ENST00000363016 102 ntBASIC5.37□□□□□ -1.55
LDLRP01130 RN7SKP124-201ENST00000364730 341 ntBASIC5.37□□□□□ -1.55
LDLRP01130 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LDLRP01130 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.37□□□□□ -1.55
LDLRP01130 MIR1286-201ENST00000408112 78 ntBASIC5.37□□□□□ -1.55
LDLRP01130 RN7SKP59-201ENST00000410520 314 ntBASIC5.37□□□□□ -1.55
LDLRP01130 HYALP1-201ENST00000417674 1279 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.37□□□□□ -1.55
LDLRP01130 AL034379.1-201ENST00000423216 253 ntBASIC5.37□□□□□ -1.55
LDLRP01130 NPM1P26-201ENST00000426339 738 ntBASIC5.37□□□□□ -1.55
LDLRP01130 MRPS33P4-201ENST00000434892 317 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 RPS15AP29-201ENST00000445539 400 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AL606490.1-201ENST00000452266 765 ntBASIC5.37□□□□□ -1.55
LDLRP01130 LRRC37A14P-201ENST00000452297 462 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 RN7SL329P-201ENST00000467740 299 ntBASIC5.37□□□□□ -1.55
LDLRP01130 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 CDH12P4-201ENST00000517835 295 ntBASIC5.37□□□□□ -1.55
LDLRP01130 CDH12P3-201ENST00000517935 295 ntBASIC5.37□□□□□ -1.55
LDLRP01130 CDH12P1-201ENST00000518435 295 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 OR10G5P-201ENST00000532733 358 ntBASIC5.37□□□□□ -1.55
LDLRP01130 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.37□□□□□ -1.55
LDLRP01130 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.37□□□□□ -1.55
LDLRP01130 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.37□□□□□ -1.55
LDLRP01130 MIR7853-201ENST00000584820 132 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AC007423.1-201ENST00000605009 627 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AC015660.5-201ENST00000623238 564 ntBASIC5.37□□□□□ -1.55
LDLRP01130 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.37□□□□□ -1.55
LDLRP01130 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LDLRP01130 AC009452.1-201ENST00000640823 606 ntBASIC5.37□□□□□ -1.55
LDLRP01130 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.37□□□□□ -1.55
LDLRP01130 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LDLRP01130 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LDLRP01130 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LDLRP01130 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LDLRP01130 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LDLRP01130 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 OR4F13P-202ENST00000560066 2054 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LDLRP01130 AL121886.1-201ENST00000358609 435 ntBASIC5.36□□□□□ -1.55
LDLRP01130 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LDLRP01130 HMGB1P20-201ENST00000402555 677 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC096921.1-201ENST00000411661 375 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AL356968.2-201ENST00000412769 1257 ntBASIC5.36□□□□□ -1.55
LDLRP01130 TRIM60P17-201ENST00000415181 719 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 AC127526.2-201ENST00000426436 775 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AL390879.2-203ENST00000426943 1121 ntBASIC5.36□□□□□ -1.55
LDLRP01130 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 NDUFB4P8-201ENST00000435351 367 ntBASIC5.36□□□□□ -1.55
LDLRP01130 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 AL590762.3-201ENST00000436372 640 ntBASIC5.36□□□□□ -1.55
LDLRP01130 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.36□□□□□ -1.55
LDLRP01130 TXNP2-201ENST00000443918 295 ntBASIC5.36□□□□□ -1.55
LDLRP01130 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 OR7E116P-201ENST00000448529 957 ntBASIC5.36□□□□□ -1.55
LDLRP01130 CYCSP53-201ENST00000455540 265 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC011225.1-201ENST00000457751 369 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 PSAT1P4-201ENST00000466500 526 ntBASIC5.36□□□□□ -1.55
LDLRP01130 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 NENFP3-201ENST00000503735 313 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 OR10D4P-201ENST00000525892 951 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 AC008126.1-201ENST00000549019 480 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 AC006530.1-201ENST00000555980 571 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 MTND2P13-201ENST00000577438 1039 ntBASIC5.36□□□□□ -1.55
LDLRP01130 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 AC145423.1-201ENST00000605712 336 ntBASIC5.36□□□□□ -1.55
LDLRP01130 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.36□□□□□ -1.55
LDLRP01130 AC138965.3-201ENST00000623875 498 ntBASIC5.36□□□□□ -1.55
LDLRP01130 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.36□□□□□ -1.55
LDLRP01130 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
LDLRP01130 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
LDLRP01130 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.36□□□□□ -1.55
LDLRP01130 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms