Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL024507.1-201ENST00000412741 274 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL133173.1-201ENST00000423458 397 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 RPL7AP49-201ENST00000429522 581 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL591438.1-201ENST00000433508 581 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 SUMO2P3-201ENST00000438311 288 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL606517.1-201ENST00000446914 387 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 RPL32P14-201ENST00000463196 378 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 NAMPTP2-201ENST00000505629 1115 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC109464.1-201ENST00000511091 819 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC005363.1-201ENST00000530779 351 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC024405.1-201ENST00000532521 1042 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 OR8X1P-201ENST00000534542 869 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC106730.2-201ENST00000566641 540 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC027243.2-201ENST00000602530 724 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 MIR6071-201ENST00000616741 78 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC099654.6-201ENST00000636487 512 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 YES1P1-201ENST00000418510 1628 ntBASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV7S3A2A0A539 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AP000641.1-201ENST00000531988 1639 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC002525.1-201ENST00000624392 1622 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 RN7SKP187-201ENST00000365536 330 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 RN7SKP240-201ENST00000410583 375 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 RNU4-27P-201ENST00000410889 139 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AL158050.1-201ENST00000416077 457 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC017078.1-201ENST00000416146 368 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 BTF3P9-201ENST00000418784 283 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AL136231.1-201ENST00000429407 730 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC011242.1-201ENST00000433596 1158 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AL645931.1-201ENST00000439737 410 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC019185.1-201ENST00000442718 389 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 RPL23AP23-201ENST00000452590 471 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 RPL15P21-201ENST00000495592 567 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 SUMO1P1-201ENST00000497904 306 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 IMPA1P1-201ENST00000510718 842 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 RFPL4AP3-201ENST00000515267 345 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 CDC42P3-201ENST00000518493 633 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AP001372.4-201ENST00000524889 472 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC004923.2-201ENST00000529649 369 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms