Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CES5AP1-201ENST00000400418 859 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AL590290.1-201ENST00000405336 380 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AMD1P2-201ENST00000412936 992 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC023141.10-201ENST00000415634 200 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC009961.2-201ENST00000435771 251 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 RPL23AP19-201ENST00000436229 369 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 NDUFA5P4-201ENST00000436704 385 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC090954.1-201ENST00000445502 361 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC019084.1-201ENST00000457337 432 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 RPS4XP17-201ENST00000479057 754 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC127024.1-201ENST00000490847 418 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC112204.1-201ENST00000502591 103 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC093809.1-201ENST00000509155 340 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC026700.1-201ENST00000512074 544 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC114801.1-201ENST00000512633 297 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 OR5M4P-201ENST00000529436 925 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC013828.2-201ENST00000532487 235 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AP003034.1-201ENST00000534621 422 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 OR4F28P-201ENST00000559128 938 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 OR4F8P-201ENST00000589943 937 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AP001836.1-201ENST00000604675 523 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 U47924.1-201ENST00000606539 434 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC018690.1-201ENST00000608144 626 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC006065.6-201ENST00000625201 545 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 SNORA43.5-201ENST00000631270 138 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 AC006210.2-201ENST00000367074 1545 ntBASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHGA11Q9Y5H2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 SF3A3P1-201ENST00000446317 1477 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 RNU6-878P-201ENST00000384578 110 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 HMGB3P1-201ENST00000393368 573 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 PEX12P1-201ENST00000400284 1048 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.608-201ENST00000410647 95 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL136133.1-201ENST00000413694 376 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC127537.1-201ENST00000418183 748 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL035410.1-201ENST00000427409 427 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC244505.2-201ENST00000435089 759 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC002553.1-201ENST00000442828 802 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LIN28AP2-201ENST00000445283 458 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 OR7E7P-201ENST00000455678 1012 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC015724.1-201ENST00000478577 156 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms