Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 HMGN2P47-201ENST00000559378 272 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 DNM1P31-201ENST00000564149 696 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC022916.3-201ENST00000592961 742 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 EXOSC3P2-201ENST00000594464 497 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC005518.2-201ENST00000603254 282 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC124303.1-201ENST00000605703 360 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC009948.5-201ENST00000624360 4406 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RLIMP2-201ENST00000427891 1563 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 DCAF13P3-201ENST00000561147 1334 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC133552.3-201ENST00000572236 1869 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 RNU6-1085P-201ENST00000363576 107 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 RNA5SP88-201ENST00000365560 109 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 MTCYBP36-201ENST00000404146 440 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AL603908.1-201ENST00000406098 201 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 RPS21P8-201ENST00000413365 247 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 PDCL2P1-201ENST00000419302 352 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 SNX18P3-201ENST00000424993 835 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 FTH1P5-201ENST00000425761 545 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 YWHAQP9-201ENST00000445891 512 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 OR7E62P-201ENST00000456741 477 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 RN7SL549P-201ENST00000478997 282 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 RPS15AP36-201ENST00000492022 382 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC084871.2-201ENST00000503355 464 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 MRPL49P1-201ENST00000505951 535 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC008868.1-201ENST00000509786 737 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC106774.2-201ENST00000510266 406 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 OR7E96P-201ENST00000530816 976 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 OR7E87P-201ENST00000532397 929 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 UBE2CP1-201ENST00000557130 554 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ATP5F1P7-201ENST00000567330 760 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC020914.6-201ENST00000594327 272 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC004853.1-201ENST00000604902 698 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AL353898.2-201ENST00000623000 255 ntBASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUEDC1Q9NWM3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CUEDC1Q9NWM3 AC109315.1-201ENST00000584143 1347 ntBASIC7.27□□□□□ -1.24
CUEDC1Q9NWM3 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CUEDC1Q9NWM3 AP002907.1-201ENST00000606361 1430 ntBASIC7.27□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms