Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL391156.1-201ENST00000554965 554 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 VN1R81P-201ENST00000602085 372 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 AL022067.1-201ENST00000602426 454 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC025857.2-201ENST00000602711 238 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 AP002360.4-201ENST00000606980 481 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC007786.3-201ENST00000615154 596 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 MIR6729-201ENST00000618194 65 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 FAM27E2-201ENST00000619668 403 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 MRPL57P1-201ENST00000621486 265 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC129915.3-201ENST00000634128 948 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC099654.6-201ENST00000636487 512 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.39□□□□□ -1.39
CD248Q9HCU0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.39□□□□□ -1.39
CD248Q9HCU0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD248Q9HCU0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD248Q9HCU0 AC107021.2-201ENST00000567714 2095 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 RNU11-6P-201ENST00000391127 133 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL121835.1-201ENST00000404250 354 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 RN7SKP17-201ENST00000411242 351 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 HMGN1P20-201ENST00000411849 300 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 BX664727.1-201ENST00000416024 466 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL354766.1-201ENST00000423396 542 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC092447.2-201ENST00000435487 669 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC073109.1-201ENST00000445066 978 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 HIGD1AP16-201ENST00000450986 258 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 HLA-DPA3-207ENST00000454398 229 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 RPL32P14-201ENST00000463196 378 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC023194.2-201ENST00000465398 406 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC109927.2-201ENST00000506416 303 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 MTCYBP16-201ENST00000509187 1129 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 RNA5SP340-201ENST00000517132 107 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC060775.1-201ENST00000518241 520 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC091163.3-201ENST00000518269 1144 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 IGHV1-14-201ENST00000523391 241 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 GCSHP4-201ENST00000538792 439 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL358913.1-201ENST00000554342 121 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC135626.1-201ENST00000556983 435 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC090888.1-201ENST00000561335 1141 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC007346.1-201ENST00000569208 867 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL353778.1-201ENST00000603149 408 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC121247.2-201ENST00000604776 136 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL591167.1-201ENST00000607321 456 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC017037.3-201ENST00000625016 472 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC005609.4-201ENST00000625071 447 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AC092192.1-201ENST00000633154 1018 ntBASIC6.38□□□□□ -1.39
CD248Q9HCU0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.38□□□□□ -1.39
CD248Q9HCU0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD248Q9HCU0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms