Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 C1DP1-201ENST00000426049 402 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 RAC1P8-201ENST00000427086 527 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 ELOCP14-201ENST00000428070 331 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 ELOCP7-201ENST00000439968 331 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 TRIM60P16-201ENST00000444048 694 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 ARL5AP2-201ENST00000444698 533 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AL162395.1-201ENST00000457882 422 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC111000.3-201ENST00000508057 576 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 FGF7P4-201ENST00000509595 295 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 MTCO1P40-201ENST00000574371 625 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 OR1E3-201ENST00000575608 948 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC098614.4-201ENST00000607601 462 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AL121936.2-201ENST00000641935 662 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC091046.3-201ENST00000631455 1574 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AL359263.1-201ENST00000441188 2796 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 LARP1BP1-201ENST00000506036 1359 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 RNU6-1160P-201ENST00000384546 104 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 TATDN1P1-201ENST00000414123 891 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AL773545.3-201ENST00000414297 706 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 SAR1AP4-201ENST00000429225 591 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CEACAMP5-201ENST00000448037 961 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 PSPHP1-201ENST00000450062 261 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 OR13C1P-201ENST00000457612 963 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC066616.1-201ENST00000486795 413 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC105252.1-201ENST00000503089 286 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC104090.1-201ENST00000506341 1171 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 RNA5SP303-201ENST00000516192 130 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC110588.1-201ENST00000559699 137 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 RN7SL230P-201ENST00000580835 303 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC012360.2-201ENST00000609349 391 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AC005858.4-201ENST00000623191 700 ntBASIC8.11□□□□□ -1.11
TRIM47Q96LD4 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TRIM47Q96LD4 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms