Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 RNU1-19P-201ENST00000363306 165 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AL391422.1-201ENST00000402155 436 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC124944.2-201ENST00000429866 1242 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 RPL19P16-201ENST00000433839 588 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 CALM1P2-201ENST00000452941 448 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 DNAJB5P1-201ENST00000454004 806 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC037198.2-201ENST00000478845 733 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 PCNAP1-201ENST00000505363 709 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 SCARNA16.4-201ENST00000516956 187 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC010503.3-201ENST00000594355 540 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 FO393422.1-201ENST00000603908 708 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC034236.3-201ENST00000605999 461 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AP001005.3-201ENST00000622049 129 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 SPATA2P1-201ENST00000431223 2055 ntBASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC019072.1-201ENST00000604535 1551 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 RNA5SP510-201ENST00000364697 99 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 OR1L6-202ENST00000373684 1044 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 SNORA16A-201ENST00000384342 137 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 MT-TP-201ENST00000387461 68 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 IPPKP1-201ENST00000422501 768 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 MTCO1P57-201ENST00000432182 261 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 HMGN1P36-201ENST00000446623 298 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 NPM1P39-201ENST00000449818 867 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 OR52E7P-201ENST00000452394 933 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 EIF2S2P4-201ENST00000461070 984 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 RPL15P21-201ENST00000495592 567 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 IMPA1P1-201ENST00000510718 842 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC092709.1-201ENST00000521355 1045 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC005341.1-201ENST00000571086 708 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 RN7SL290P-201ENST00000578661 300 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 RNA5SP440-201ENST00000612665 119 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 AF117829.2-201ENST00000619538 361 ntBASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms